Information for 3-AGGGGCTAGA (Motif 17)

C G T A A C T G C T A G C T A G A C T G A G T C A C G T C G T A A C T G C G T A
Reverse Opposite:
G C A T A G T C G C A T T G C A A C T G A G T C A G T C A G T C A G T C C G A T
p-value:1e-8
log p-value:-1.937e+01
Information Content per bp:1.859
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.47%
Number of Background Sequences with motif67.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets49.0 +/- 22.1bp
Average Position of motif in Background52.8 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:AGGGGCTAGA---
AGGTGNCAGACAG
 C G T A A C T G C T A G C T A G A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGGGCTAGA--
AGGTGHCAGACA
 C G T A A C T G C T A G C T A G A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGGGGCTAGA---
BCNGGTTCTAGANCN
 A C G T A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGGGCTAGA
GGAGGGGGAA--
 A C G T A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T C G T A A C T G C G T A
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AGGGGCTAGA
NRRGGGTCTT--
 A C G T A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T C G T A A C T G C G T A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGCTAGA--
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AGGGGCTAGA---
NNTNNGGGGCGGNGNGN
 A C G T A C G T A C G T A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A

KLF13/MA0657.1/Jaspar

Match Rank:8
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AGGGGCTAGA---
CAAAAAGGGGCGTGGCAT
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T
G T A C G T C A G T C A G T C A C T G A C T G A C A T G C T A G A C T G C T A G G A T C T A C G A G C T C A T G C A T G G A T C G T C A G A C T

PB0090.1_Zbtb12_1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGGGGCTAGA----
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T C G T A A C T G C T A G C T A G A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:AGGGGCTAGA---
--GGGCGGGAAGG
 C G T A A C T G C T A G C T A G A C T G A G T C A C G T C G T A A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G