Information for 5-CCTTTACCAACTT (Motif 7)

A G T C G T A C A C G T A C G T A C G T C T G A A T G C A G T C C G T A C G T A A T G C A C G T A C G T
Reverse Opposite:
C G T A C G T A A T C G C G A T A C G T A C T G A T C G A G C T C G T A C G T A C G T A A C T G A C T G
p-value:1e-10
log p-value:-2.501e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.8 +/- 29.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:1
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CCTTTACCAACTT
---TTMACACCTT
 A G T C G T A C A C G T A C G T A C G T C T G A A T G C A G T C C G T A C G T A A T G C A C G T A C G T
A C G T A C G T A C G T C A G T G A C T G T A C C T G A A T G C T C G A T A G C G T A C G A C T G A C T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:2
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CCTTTACCAACTT---
--TTGACCTANTTATN
 A G T C G T A C A C G T A C G T A C G T C T G A A T G C A G T C C G T A C G T A A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCTTTACCAACTT
--GGTGCCAAGT-
 A G T C G T A C A C G T A C G T A C G T C T G A A T G C A G T C C G T A C G T A A T G C A C G T A C G T
A C G T A C G T T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCTTTACCAACTT
--TTTTCCA----
 A G T C G T A C A C G T A C G T A C G T C T G A A T G C A G T C C G T A C G T A A T G C A C G T A C G T
A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CCTTTACCAACTT
--ATTAACACCT-
 A G T C G T A C A C G T A C G T A C G T C T G A A T G C A G T C C G T A C G T A A T G C A C G T A C G T
A C G T A C G T G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCTTTACCAACTT
-ATTTTCCATT--
 A G T C G T A C A C G T A C G T A C G T C T G A A T G C A G T C C G T A C G T A A T G C A C G T A C G T
A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCTTTACCAACTT
---ATGCCAACC-
 A G T C G T A C A C G T A C G T A C G T C T G A A T G C A G T C C G T A C G T A A T G C A C G T A C G T
A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:8
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CCTTTACCAACTT
---TGACCTARTT
 A G T C G T A C A C G T A C G T A C G T C T G A A T G C A G T C C G T A C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCTTTACCAACTT
---TTGCCAAG--
 A G T C G T A C A C G T A C G T A C G T C T G A A T G C A G T C C G T A C G T A A T G C A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CCTTTACCAACTT---
ACTATGCCAACCTACC
 A G T C G T A C A C G T A C G T A C G T C T G A A T G C A G T C C G T A C G T A A T G C A C G T A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C