Information for 2-TTTTCTCCTTGGA (Motif 2)

A C G T A C G T A C G T A G C T G T A C A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C C G T A C T G A A C T G C T A G C G T A A C T G C T G A C G T A C G T A C G T A
p-value:1e-13
log p-value:-3.085e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.3 +/- 15.0bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT3/MA0144.2/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TTTTCTCCTTGGA--
----CTTCTGGGAAA
 A C G T A C G T A C G T A G C T G T A C A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:TTTTCTCCTTGGA---
-----TTCTTGGAAAN
 A C G T A C G T A C G T A G C T G T A C A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T C G A T A G T C G A C T C A G T C T A G C T A G C T G A C G T A T C G A G A C T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:TTTTCTCCTTGGA------
----TTTCCTGGAAAGNNN
 A C G T A C G T A C G T A G C T G T A C A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTTTCTCCTTGGA
---TGACCTTGAN
 A C G T A C G T A C G T A G C T G T A C A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G T A
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TTTTCTCCTTGGA
TTTTTTTTCNNGTN
 A C G T A C G T A C G T A C G T A G C T G T A C A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G T A
G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:TTTTCTCCTTGGA
---TGACCTTGAV
 A C G T A C G T A C G T A G C T G T A C A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G T A
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Bcl6/MA0463.1/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:TTTTCTCCTTGGA-----
----TTTCCTAGAAAGCA
 A C G T A C G T A C G T A G C T G T A C A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TTTTCTCCTTGGA-
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C G T A C G T A G C T G T A C A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G T A A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:TTTTCTCCTTGGA
-BNTGDCCTTG--
 A C G T A C G T A C G T A G C T G T A C A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G T A
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TTTTCTCCTTGGA---
----TTTCCNGGAAAN
 A C G T A C G T A C G T A G C T G T A C A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C