Information for 1-GCAGCWGVAAAACAHC (Motif 1)

A C T G G T A C C T G A C A T G T G A C C G T A A T C G T C G A G T C A C G T A C G T A C G T A A G T C C G T A G C T A A G T C
Reverse Opposite:
A C T G C G A T C G A T A C T G A C G T A C G T C G A T A C G T A C G T A T G C C G A T A C T G G T A C A G C T A C T G T G A C
p-value:1e-15
log p-value:-3.678e+01
Information Content per bp:1.736
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.2 +/- 21.2bp
Average Position of motif in Background62.9 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0121.1_Foxj3_2/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCAGCWGVAAAACAHC---
--AACACCAAAACAAAGGA
 A C T G G T A C C T G A C A T G T G A C C G T A A T C G T C G A G T C A C G T A C G T A C G T A A G T C C G T A G C T A A G T C A C G T A C G T A C G T
A C G T A C G T G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:GCAGCWGVAAAACAHC---
---ATATCAAAACAAAACA
 A C T G G T A C C T G A C A T G T G A C C G T A A T C G T C G A G T C A C G T A C G T A C G T A A G T C C G T A G C T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0141.1_Isgf3g_2/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GCAGCWGVAAAACAHC----
------GCAAAACATTACTA
 A C T G G T A C C T G A C A T G T G A C C G T A A T C G T C G A G T C A C G T A C G T A C G T A A G T C C G T A G C T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

FOXD2/MA0847.1/Jaspar

Match Rank:4
Score:0.58
Offset:7
Orientation:forward strand
Alignment:GCAGCWGVAAAACAHC
-------GTAAACA--
 A C T G G T A C C T G A C A T G T G A C C G T A A T C G T C G A G T C A C G T A C G T A C G T A A G T C C G T A G C T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:5
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GCAGCWGVAAAACAHC
-------GTAAACAA-
 A C T G G T A C C T G A C A T G T G A C C G T A A T C G T C G A G T C A C G T A C G T A C G T A A G T C C G T A G C T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T

PB0122.1_Foxk1_2/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCAGCWGVAAAACAHC-
--CAAACAACAACACCT
 A C T G G T A C C T G A C A T G T G A C C G T A A T C G T C G A G T C A C G T A C G T A C G T A A G T C C G T A G C T A A G T C A C G T
A C G T A C G T G T A C G C T A G T C A C T G A G A T C T G C A T C G A A G T C T C G A C G T A G A T C C G T A G A T C G T A C G A C T

Foxj2/MA0614.1/Jaspar

Match Rank:7
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GCAGCWGVAAAACAHC
-------GTAAACAA-
 A C T G G T A C C T G A C A T G T G A C C G T A A T C G T C G A G T C A C G T A C G T A C G T A A G T C C G T A G C T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T

FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer

Match Rank:8
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:GCAGCWGVAAAACAHC-
-------GTAAACAWBN
 A C T G G T A C C T G A C A T G T G A C C G T A A T C G T C G A G T C A C G T A C G T A C G T A A G T C C G T A G C T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G A T G T C A G T C A T G C A G A T C G C T A G C T A A C T G T C G A

PB0120.1_Foxj1_2/Jaspar

Match Rank:9
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCAGCWGVAAAACAHC--
---ATGTCACAACAACAC
 A C T G G T A C C T G A C A T G T G A C C G T A A T C G T C G A G T C A C G T A C G T A C G T A A G T C C G T A G C T A A G T C A C G T A C G T
A C G T A C G T A C G T C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

FOXP3/MA0850.1/Jaspar

Match Rank:10
Score:0.57
Offset:7
Orientation:forward strand
Alignment:GCAGCWGVAAAACAHC
-------GTAAACA--
 A C T G G T A C C T G A C A T G T G A C C G T A A T C G T C G A G T C A C G T A C G T A C G T A A G T C C G T A G C T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T