Information for 10-GAGTTGTCCA (Motif 20)

A C T G C G T A T A C G A C G T A G C T A C T G A C G T A G T C G T A C G T C A
Reverse Opposite:
C A G T A C T G A C T G C G T A T G A C C T G A G T C A A G T C A C G T G T A C
p-value:1e-8
log p-value:-1.860e+01
Information Content per bp:1.846
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.64%
Number of Background Sequences with motif103.4
Percentage of Background Sequences with motif0.21%
Average Position of motif in Targets48.1 +/- 28.4bp
Average Position of motif in Background47.1 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GAGTTGTCCA
---TTTTCCA
 A C T G C G T A T A C G A C G T A G C T A C T G A C G T A G T C G T A C G T C A
A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GAGTTGTCCA--
--ATTTTCCATT
 A C T G C G T A T A C G A C G T A G C T A C T G A C G T A G T C G T A C G T C A A C G T A C G T
A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

PH0170.1_Tgif2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GAGTTGTCCA---
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A T A C G A C G T A G C T A C T G A C G T A G T C G T A C G T C A A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GAGTTGTCCA---
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A T A C G A C G T A G C T A C T G A C G T A G T C G T A C G T C A A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0140.1_Pknox1/Jaspar

Match Rank:5
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GAGTTGTCCA---
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C T G C G T A T A C G A C G T A G C T A C T G A C G T A G T C G T A C G T C A A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0104.1_Meis2/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GAGTTGTCCA---
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A T A C G A C G T A G C T A C T G A C G T A G T C G T A C G T C A A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GAGTTGTCCA--
--ATTTTCCATT
 A C T G C G T A T A C G A C G T A G C T A C T G A C G T A G T C G T A C G T C A A C G T A C G T
A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GAGTTGTCCA---
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A T A C G A C G T A G C T A C T G A C G T A G T C G T A C G T C A A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GAGTTGTCCA----
NNNCAGCTGTCAATATN
 A C G T A C G T A C G T A C T G C G T A T A C G A C G T A G C T A C T G A C G T A G T C G T A C G T C A A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAGTTGTCCA
CGTGGGTGGTCC-
 A C G T A C G T A C G T A C T G C G T A T A C G A C G T A G C T A C T G A C G T A G T C G T A C G T C A
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T