Information for 5-CGGTGGGCATCTG (Motif 7)

A T G C C A T G C T A G A C G T A C T G A C T G C T A G A T G C G T C A A C G T A G T C C A G T A C T G
Reverse Opposite:
G T A C G T C A C T A G C G T A A C G T A T C G A G T C A G T C T A G C G T C A A G T C G T A C A T C G
p-value:1e-11
log p-value:-2.617e+01
Information Content per bp:1.795
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.30%
Number of Background Sequences with motif27.5
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets63.7 +/- 24.7bp
Average Position of motif in Background48.0 +/- 24.7bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HIC2/MA0738.1/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:CGGTGGGCATCTG
-NGTGGGCAT---
 A T G C C A T G C T A G A C G T A C T G A C T G C T A G A T G C G T C A A C G T A G T C C A G T A C T G
A C G T T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CGGTGGGCATCTG
-GGTTGGCAT---
 A T G C C A T G C T A G A C G T A C T G A C T G C T A G A T G C G T C A A C G T A G T C C A G T A C T G
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---CGGTGGGCATCTG
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A T G C C A T G C T A G A C G T A C T G A C T G C T A G A T G C G T C A A C G T A G T C C A G T A C T G
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PB0167.1_Sox13_2/Jaspar

Match Rank:4
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CGGTGGGCATCTG
GTATTGGGTGGGTAATT-
 A C G T A C G T A C G T A C G T A C G T A T G C C A T G C T A G A C G T A C T G A C T G C T A G A T G C G T C A A C G T A G T C C A G T A C T G
C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CGGTGGGCATCTG
ANTNCCGGGGGGAANTT-
 A C G T A C G T A C G T A C G T A C G T A T G C C A T G C T A G A C G T A C T G A C T G C T A G A T G C G T C A A C G T A G T C C A G T A C T G
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:CGGTGGGCATCTG--
-----GCCATCTGTT
 A T G C C A T G C T A G A C G T A C T G A C T G C T A G A T G C G T C A A C G T A G T C C A G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T

PB0193.1_Tcfe2a_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CGGTGGGCATCTG-----
-CCNNACCATCTGGCCTN
 A T G C C A T G C T A G A C G T A C T G A C T G C T A G A T G C G T C A A C G T A G T C C A G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A G T C T A G C T A C G C T A G T C G A G T A C A G T C C G T A A G C T T G A C A G C T C A T G A T C G G T A C G A T C A G C T C A G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CGGTGGGCATCTG--
-----ACCATCTGTT
 A T G C C A T G C T A G A C G T A C T G A C T G C T A G A T G C G T C A A C G T A G T C C A G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGGTGGGCATCTG
-GCTCGGSCTC--
 A T G C C A T G C T A G A C G T A C T G A C T G C T A G A T G C G T C A A C G T A G T C C A G T A C T G
A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:CGGTGGGCATCTG----
-----GCCAGCTGBTNB
 A T G C C A T G C T A G A C G T A C T G A C T G C T A G A T G C G T C A A C G T A G T C C A G T A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C