Information for 2-GGAGAAATCATCC (Motif 4)

A C T G A C T G C G T A A T C G C G T A C G T A C G T A C G A T A G T C C G T A A G C T A G T C A T G C
Reverse Opposite:
A T C G T C A G C T G A A C G T A C T G G C T A A C G T A C G T A C G T A T G C C G A T A G T C A G T C
p-value:1e-13
log p-value:-3.174e+01
Information Content per bp:1.908
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.18%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets57.0 +/- 27.4bp
Average Position of motif in Background59.9 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--GGAGAAATCATCC--
AAGGCGAAATCATCGCA
 A C G T A C G T A C T G A C T G C G T A A T C G C G T A C G T A C G T A C G A T A G T C C G T A A G C T A G T C A T G C A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

PB0126.1_Gata5_2/Jaspar

Match Rank:2
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGAGAAATCATCC-
GACAGAGATATCAGTGT
 A C G T A C G T A C G T A C T G A C T G C G T A A T C G C G T A C G T A C G T A C G A T A G T C C G T A A G C T A G T C A T G C A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGAGAAATCATCC
---CAAATCACTG
 A C T G A C T G C G T A A T C G C G T A C G T A C G T A C G A T A G T C C G T A A G C T A G T C A T G C
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGAGAAATCATCC
-ATGACGTCATCN
 A C T G A C T G C G T A A T C G C G T A C G T A C G T A C G A T A G T C C G T A A G C T A G T C A T G C
A C G T T C G A G C A T A C T G C T G A A G T C T C A G G A C T G T A C C G T A A G C T A G T C G A T C

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGAGAAATCATCC---
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A T C G C G T A C G T A C G T A C G A T A G T C C G T A A G C T A G T C A T G C A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

JDP2(var.2)/MA0656.1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGAGAAATCATCC
GATGACGTCATC-
 A C T G A C T G C G T A A T C G C G T A C G T A C G T A C G A T A G T C C G T A A G C T A G T C A T G C
A C T G T C G A A C G T A C T G C T G A A G T C T C A G A C G T G T A C C T G A A G C T A T G C A C G T

JUND(var.2)/MA0492.1/Jaspar

Match Rank:7
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGAGAAATCATCC--
NATGACATCATCNNN
 A C T G A C T G C G T A A T C G C G T A C G T A C G T A C G A T A G T C C G T A A G C T A G T C A T G C A C G T A C G T
A C T G T C G A A C G T A C T G C T G A A G T C T C G A A C G T G T A C C G T A A G C T A G T C G C A T G A C T G C A T

PH0125.1_Obox5_2/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGAGAAATCATCC-----
-GATAATTAATCCCTCTT
 A C T G A C T G C G T A A T C G C G T A C G T A C G T A C G A T A G T C C G T A A G C T A G T C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T A C T G C G T A A G C T C T G A C G T A G C A T C G A T C G T A C G T A C A G T G T A C A G T C A G T C A G C T A G T C G A C T A G C T

Dux/MA0611.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGAGAAATCATCC
---CCAATCAA--
 A C T G A C T G C G T A A T C G C G T A C G T A C G T A C G A T A G T C C G T A A G C T A G T C A T G C
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T

PH0124.1_Obox5_1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGAGAAATCATCC-----
-NANANTTAATCCCNNNN
 A C T G A C T G C G T A A T C G C G T A C G T A C G T A C G A T A G T C C G T A A G C T A G T C A T G C A C G T A C G T A C G T A C G T A C G T
A C G T C A T G C G T A C T G A C T G A C G A T G C A T C G A T C G T A C G T A C G A T G A T C A G T C A G T C A G C T A G T C G A C T C G T A