Information for 6-YCMRTCCAMA (Motif 16)

G A T C T G A C T G C A C T G A C A G T T A G C G A T C G T C A G T A C G T C A
Reverse Opposite:
C A G T C A T G C A G T C T A G A T C G G T C A G A C T A C G T A C T G C T A G
p-value:1e-8
log p-value:-1.993e+01
Information Content per bp:1.453
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.60%
Number of Background Sequences with motif254.7
Percentage of Background Sequences with motif0.53%
Average Position of motif in Targets44.5 +/- 23.4bp
Average Position of motif in Background47.6 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-YCMRTCCAMA
TCCAATCCACA
 A C G T G A T C T G A C T G C A C T G A C A G T T A G C G A T C G T C A G T A C G T C A
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:YCMRTCCAMA--
SSAATCCACANN
 G A T C T G A C T G C A C T G A C A G T T A G C G A T C G T C A G T A C G T C A A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:YCMRTCCAMA---
-NWAACCACADNN
 G A T C T G A C T G C A C T G A C A G T T A G C G A T C G T C A G T A C G T C A A C G T A C G T A C G T
A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:YCMRTCCAMA---
--AAACCACAGAN
 G A T C T G A C T G C A C T G A C A G T T A G C G A T C G T C A G T A C G T C A A C G T A C G T A C G T
A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:YCMRTCCAMA--
--AAACCACANN
 G A T C T G A C T G C A C T G A C A G T T A G C G A T C G T C A G T A C G T C A A C G T A C G T
A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:YCMRTCCAMA-
-NAAACCACAG
 G A T C T G A C T G C A C T G A C A G T T A G C G A T C G T C A G T A C G T C A A C G T
A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

ZNF354C/MA0130.1/Jaspar

Match Rank:7
Score:0.62
Offset:3
Orientation:forward strand
Alignment:YCMRTCCAMA
---ATCCAC-
 G A T C T G A C T G C A C T G A C A G T T A G C G A T C G T C A G T A C G T C A
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:YCMRTCCAMA--
--AAACCACAGC
 G A T C T G A C T G C A C T G A C A G T T A G C G A T C G T C A G T A C G T C A A C G T A C G T
A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--YCMRTCCAMA
KGCCCTTCCCCA
 A C G T A C G T G A T C T G A C T G C A C T G A C A G T T A G C G A T C G T C A G T A C G T C A
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A

PB0121.1_Foxj3_2/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----YCMRTCCAMA---
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T G A T C T G A C T G C A C T G A C A G T T A G C G A T C G T C A G T A C G T C A A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A