Information for 2-TCTGGAGAAT (Motif 10)

A C G T A T G C A C G T A C T G T C A G T G C A C T A G G T C A C T G A G A C T
Reverse Opposite:
C T G A A G C T C A G T A G T C A C G T A G T C G T A C G T C A A T C G G T C A
p-value:1e-10
log p-value:-2.363e+01
Information Content per bp:1.826
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif149.8
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets58.0 +/- 25.6bp
Average Position of motif in Background51.0 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer

Match Rank:1
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TCTGGAGAAT
ANTTCTNNAGAA-
 A C G T A C G T A C G T A C G T A T G C A C G T A C T G T C A G T G C A C T A G G T C A C T G A G A C T
C T G A A G C T A C G T A C G T A G T C G A C T G A C T C T G A C T G A C T A G C G T A C G T A A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:2
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:TCTGGAGAAT
--TGGAAAA-
 A C G T A T G C A C G T A C T G T C A G T G C A C T A G G T C A C T G A G A C T
A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T

Stat6/MA0520.1/Jaspar

Match Rank:3
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TCTGGAGAAT-
CATTTCCTGAGAAAT
 A C G T A C G T A C G T A C G T A C G T A T G C A C G T A C T G T C A G T G C A C T A G G T C A C T G A G A C T A C G T
A T G C C G T A A G C T A C G T C G A T G T A C G A T C C G A T T A C G C T G A C A T G C G T A C T G A T G C A G A C T

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TCTGGAGAAT
TTCTNMGGAA-
 A C G T A C G T A T G C A C G T A C T G T C A G T G C A C T A G G T C A C T G A G A C T
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCTGGAGAAT
GGTCTGGCAT--
 A C G T A C G T A C G T A T G C A C G T A C T G T C A G T G C A C T A G G T C A C T G A G A C T
A T C G C T A G G A C T A G T C A C G T A C T G A T C G G T A C C G T A C G A T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------TCTGGAGAAT
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T A C T G T C A G T G C A C T A G G T C A C T G A G A C T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

GFX(?)/Promoter/Homer

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCTGGAGAAT
TCTCGCGAGAAT
 A C G T A C G T A C G T A T G C A C G T A C T G T C A G T G C A C T A G G T C A C T G A G A C T
G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:8
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----TCTGGAGAAT
VBSYGTCTGG-----
 A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C G T A C T G T C A G T G C A C T A G G T C A C T G A G A C T
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TCTGGAGAAT
NATGGAAAAN
 A C G T A T G C A C G T A C T G T C A G T G C A C T A G G T C A C T G A G A C T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCTGGAGAAT
CTGTCTGG-----
 A C G T A C G T A C G T A C G T A T G C A C G T A C T G T C A G T G C A C T A G G T C A C T G A G A C T
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T A C G T