Information for 4-TTTYTMACCTSAA (Motif 8)

C G A T A G C T A C G T A G C T A C G T T G A C G C T A T G A C G T A C C G A T A T G C T C G A C T G A
Reverse Opposite:
A G C T A G C T T A C G C G T A A C T G A C T G C A G T A C T G C G T A C T G A C G T A C T G A C G T A
p-value:1e-11
log p-value:-2.653e+01
Information Content per bp:1.738
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif12.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets52.1 +/- 25.9bp
Average Position of motif in Background58.4 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTTYTMACCTSAA
ATTAACACCT---
 C G A T A G C T A C G T A G C T A C G T T G A C G C T A T G A C G T A C C G A T A T G C T C G A C T G A
G C T A G A C T G A C T T G C A C G T A A G T C C G T A T A G C G A T C G A C T A C G T A C G T A C G T

TBR1/MA0802.1/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTTYTMACCTSAA
TTTCACACCT---
 C G A T A G C T A C G T A G C T A C G T T G A C G C T A T G A C G T A C C G A T A T G C T C G A C T G A
C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTTYTMACCTSAA
KTTCACACCT---
 C G A T A G C T A C G T A G C T A C G T T G A C G C T A T G A C G T A C C G A T A T G C T C G A C T G A
C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T

TBX2/MA0688.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TTTYTMACCTSAA
TTTCACACCTN--
 C G A T A G C T A C G T A G C T A C G T T G A C G C T A T G A C G T A C C G A T A T G C T C G A C T G A
G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:5
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TTTYTMACCTSAA
NTTTTCACACCTT--
 A C G T A C G T C G A T A G C T A C G T A G C T A C G T T G A C G C T A T G A C G T A C C G A T A T G C T C G A C T G A
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

TBX21/MA0690.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TTTYTMACCTSAA
-TTCACACCTT--
 C G A T A G C T A C G T A G C T A C G T T G A C G C T A T G A C G T A C C G A T A T G C T C G A C T G A
A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T A C G T A C G T

PB0013.1_Eomes_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TTTYTMACCTSAA-
NNTTTTCACACCTTNNN
 A C G T A C G T A C G T C G A T A G C T A C G T A G C T A C G T T G A C G C T A T G A C G T A C C G A T A T G C T C G A C T G A A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:TTTYTMACCTSAA
----TGACCTYA-
 C G A T A G C T A C G T A G C T A C G T T G A C G C T A T G A C G T A C C G A T A T G C T C G A C T G A
A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T

TBX15/MA0803.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTTYTMACCTSAA
--TCACACCT---
 C G A T A G C T A C G T A G C T A C G T T G A C G C T A T G A C G T A C C G A T A T G C T C G A C T G A
A C G T A C G T G A C T T G A C T C G A A T G C T G C A A G T C G A T C G A C T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTTYTMACCTSAA
NNACTTACCTN--
 C G A T A G C T A C G T A G C T A C G T T G A C G C T A T G A C G T A C C G A T A T G C T C G A C T G A
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T