Information for 20-GTTTTTAATTAAA (Motif 33)

C A T G C A G T A G C T G A C T A G C T C G A T G C T A G C T A C G A T C G A T G C T A G C T A C G T A
Reverse Opposite:
G C A T C G A T C G A T G C T A G C T A C G A T C G A T G C T A T C G A C T G A T C G A G C T A G T A C
p-value:1e-6
log p-value:-1.514e+01
Information Content per bp:1.464
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets49.2 +/- 23.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0001.1_Arid3a_1/Jaspar

Match Rank:1
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTTAATTAAA---
NNNTTTTAATTAANNNN
 A C G T C A T G C A G T A G C T G A C T A G C T C G A T G C T A G C T A C G A T C G A T G C T A G C T A C G T A A C G T A C G T A C G T
C T A G C G T A C G T A C A G T G C A T G A C T A G C T C T G A C G T A C G A T G A C T T C G A C T G A C G T A T G A C T A G C A T G C

PH0100.1_Lmx1a/Jaspar

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTTAATTAAA---
NNTTTTTAATTAATTCG
 A C G T C A T G C A G T A G C T G A C T A G C T C G A T G C T A G C T A C G A T C G A T G C T A G C T A C G T A A C G T A C G T A C G T
C T A G C T A G C G A T C G A T G C A T G A C T G A C T C G T A C G T A C G A T C G A T C T G A C T G A C G A T C G A T A T G C A T C G

PH0101.1_Lmx1b/Jaspar

Match Rank:3
Score:0.80
Offset:-1
Orientation:forward strand
Alignment:-GTTTTTAATTAAA---
AGTTTTTAATTAATTTG
 A C G T C A T G C A G T A G C T G A C T A G C T C G A T G C T A G C T A C G A T C G A T G C T A G C T A C G T A A C G T A C G T A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

PH0091.1_Lhx1/Jaspar

Match Rank:4
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTTAATTAAA---
NNTTATTAATTAATNCN
 A C G T C A T G C A G T A G C T G A C T A G C T C G A T G C T A G C T A C G A T C G A T G C T A G C T A C G T A A C G T A C G T A C G T
T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G

PH0095.1_Lhx5/Jaspar

Match Rank:5
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTTAATTAAA---
ANNATTTAATTAATTNN
 A C G T C A T G C A G T A G C T G A C T A G C T C G A T G C T A G C T A C G A T C G A T G C T A G C T A C G T A A C G T A C G T A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PH0093.1_Lhx3/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTTAATTAAA---
NNTATTTAATTAATTNN
 A C G T C A T G C A G T A G C T G A C T A G C T C G A T G C T A G C T A C G A T C G A T G C T A G C T A C G T A A C G T A C G T A C G T
T G C A C A G T C A G T G C T A G C A T G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A A G C T C A G T G C A T A T G C

PH0069.1_Hoxc4/Jaspar

Match Rank:7
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTTAATTAAA---
NNTNNTTAATTAATNCG
 A C G T C A T G C A G T A G C T G A C T A G C T C G A T G C T A G C T A C G A T C G A T G C T A G C T A C G T A A C G T A C G T A C G T
C A G T C G T A A C G T C G A T T C A G G C A T G A C T G T C A C G T A C G A T A C G T C T G A C G T A G A C T C A G T A G T C A C T G

PH0153.1_Prop1/Jaspar

Match Rank:8
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GTTTTTAATTAAA---
GNNTNTTAATTAATNCN
 A C G T C A T G C A G T A G C T G A C T A G C T C G A T G C T A G C T A C G A T C G A T G C T A G C T A C G T A A C G T A C G T A C G T
C T A G G A C T G C A T G C A T G T A C G A C T G A C T C G T A C G T A G A C T A C G T C T G A C T G A A G C T A C G T A G T C A C T G

PB0182.1_Srf_2/Jaspar

Match Rank:9
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GTTTTTAATTAAA-
NNNNTTTTTTTTTNAAC
 A C G T A C G T A C G T C A T G C A G T A G C T G A C T A G C T C G A T G C T A G C T A C G A T C G A T G C T A G C T A C G T A A C G T
C G A T C G T A T C G A A C G T C A G T C A G T C A G T C G A T A C G T A C G T A C G T G A C T G A C T G C A T G C T A T G C A A T G C

PH0051.1_Hoxa4/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GTTTTTAATTAAA---
GATTATTAATTAACTTG
 A C G T C A T G C A G T A G C T G A C T A G C T C G A T G C T A G C T A C G A T C G A T G C T A G C T A C G T A A C G T A C G T A C G T
C T A G C T G A G A C T G A C T T C G A G C A T G A C T G T C A C G T A G A C T A C G T C T G A C G T A A G T C C A G T A G C T A C T G