Information for 12-CCCACGAATT (Motif 29)

A G T C A G T C A G T C G T C A T A G C C A T G G T C A C G T A A C G T A C G T
Reverse Opposite:
C G T A G T C A A C G T A C G T G A T C A C T G A C G T C T A G A C T G A C T G
p-value:1e-7
log p-value:-1.685e+01
Information Content per bp:1.855
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif18.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets48.4 +/- 24.9bp
Average Position of motif in Background54.6 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0109.1_Nkx1-1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCCACGAATT------
NCCCACTAATTAGCGCA
 A C G T A G T C A G T C A G T C G T C A T A G C C A T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G C T G T A C A T G C G A T C T C G A A G T C G A C T G T C A C G T A C G A T A C G T C T G A T C A G A G T C A C T G A T G C G C T A

EGR4/MA0733.1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CCCACGAATT-
TTACGCCCACGCATTT
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C G T C A T A G C C A T G G T C A C G T A A C G T A C G T A C G T
G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

HOXA5/MA0158.1/Jaspar

Match Rank:3
Score:0.66
Offset:2
Orientation:forward strand
Alignment:CCCACGAATT
--CACTAATT
 A G T C A G T C A G T C G T C A T A G C C A T G G T C A C G T A A C G T A C G T
A C G T A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:4
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CCCACGAATT
CTACGCCCACGCACT
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C G T C A T A G C C A T G G T C A C G T A A C G T A C G T
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CCCACGAATT
CRCCCACGCA--
 A C G T A C G T A G T C A G T C A G T C G T C A T A G C C A T G G T C A C G T A A C G T A C G T
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T

PH0099.1_Lhx9/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCCACGAATT-------
CCCATTAATTAATCACC
 A G T C A G T C A G T C G T C A T A G C C A T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C A T G C G A T C C T G A G A C T G A C T T G C A C T G A G A C T A C G T C T G A C T G A C G A T G A T C T G C A A T G C A G T C

EGR2/MA0472.2/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CCCACGAATT
ACGCCCACGCA--
 A C G T A C G T A C G T A G T C A G T C A G T C G T C A T A G C C A T G G T C A C G T A A C G T A C G T
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T

PB0136.1_IRC900814_2/Jaspar

Match Rank:8
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCCACGAATT-----
TTTTACGACTTTCCAT
 A C G T A G T C A G T C A G T C G T C A T A G C C A T G G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T A G C T G C A T A G C T T C G A G A T C C T A G C T G A G T A C C A G T A G C T G A C T G A T C T G A C T C G A G A C T

PAX4/MA0068.2/Jaspar

Match Rank:9
Score:0.63
Offset:4
Orientation:forward strand
Alignment:CCCACGAATT--
----CTAATTAG
 A G T C A G T C A G T C G T C A T A G C C A T G G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C A G T G C T A C G T A A C G T G C A T G T C A T C A G

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:10
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCCACGAATT
YCCGCCCACGCN--
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C G T C A T A G C C A T G G T C A C G T A A C G T A C G T
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T A C G T