Information for 11-GGGGACTCCC (Motif 28)

A T C G T A C G A C T G T A C G G T C A T A G C G C A T A G T C A G T C A G T C
Reverse Opposite:
T C A G T C A G T A C G C G T A A T C G C A G T A T G C T G A C A T G C T A G C
p-value:1e-7
log p-value:-1.748e+01
Information Content per bp:1.649
Number of Target Sequences with motif92.0
Percentage of Target Sequences with motif11.04%
Number of Background Sequences with motif986.7
Percentage of Background Sequences with motif6.03%
Average Position of motif in Targets50.6 +/- 24.9bp
Average Position of motif in Background49.6 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.85
Offset:0
Orientation:reverse strand
Alignment:GGGGACTCCC--
GGGGATTCCCCC
 A T C G T A C G A C T G T A C G G T C A T A G C G C A T A G T C A G T C A G T C A C G T A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB1/MA0105.4/Jaspar

Match Rank:2
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-GGGGACTCCC--
AGGGGATTCCCCT
 A C G T A T C G T A C G A C T G T A C G G T C A T A G C G C A T A G T C A G T C A G T C A C G T A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:3
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-GGGGACTCCC--
AGGGGAATCCCCT
 A C G T A T C G T A C G A C T G T A C G G T C A T A G C G C A T A G T C A G T C A G T C A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GGGGACTCCC
GGGGATTTCC
 A T C G T A C G A C T G T A C G G T C A T A G C G C A T A G T C A G T C A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGGGACTCCC-
NGGGGATTTCCC
 A C G T A T C G T A C G A C T G T A C G G T C A T A G C G C A T A G T C A G T C A G T C A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-GGGGACTCCC
TGGGGA-----
 A C G T A T C G T A C G A C T G T A C G G T C A T A G C G C A T A G T C A G T C A G T C
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

PB0203.1_Zfp691_2/Jaspar

Match Rank:7
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGGGACTCCC-----
TACGAGACTCCTCTAAC
 A C G T A C G T A T C G T A C G A C T G T A C G G T C A T A G C G C A T A G T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

RELA/MA0107.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGGACTCCC
GGGAATTTCC
 A T C G T A C G A C T G T A C G G T C A T A G C G C A T A G T C A G T C A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGGGACTCCC
GGGGATTTCC
 A T C G T A C G A C T G T A C G G T C A T A G C G C A T A G T C A G T C A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGGGACTCCC----
TTGGGGGCGCCCCTAG
 A C G T A C G T A T C G T A C G A C T G T A C G G T C A T A G C G C A T A G T C A G T C A G T C A C G T A C G T A C G T A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G