Information for 10-ACAGCAGCAC (Motif 26)

C G T A G A T C C G T A A C T G T A G C C G T A C A T G A T G C G T C A A G T C
Reverse Opposite:
T C A G A C G T A T C G G T A C C G A T A T C G A G T C C G A T C T A G G C A T
p-value:1e-8
log p-value:-1.968e+01
Information Content per bp:1.827
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif2.88%
Number of Background Sequences with motif106.6
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets47.6 +/- 27.1bp
Average Position of motif in Background50.5 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0050.1_Osr1_1/Jaspar

Match Rank:1
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----ACAGCAGCAC--
ATTTACAGTAGCAAAA
 A C G T A C G T A C G T A C G T C G T A G A T C C G T A A C T G T A G C C G T A C A T G A T G C G T C A A G T C A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:2
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----ACAGCAGCAC--
ATGTACAGTAGCAAAG
 A C G T A C G T A C G T A C G T C G T A G A T C C G T A A C T G T A G C C G T A C A T G A T G C G T C A A G T C A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

PB0207.1_Zic3_2/Jaspar

Match Rank:3
Score:0.70
Offset:-4
Orientation:forward strand
Alignment:----ACAGCAGCAC-
GAGCACAGCAGGACA
 A C G T A C G T A C G T A C G T C G T A G A T C C G T A A C T G T A G C C G T A C A T G A T G C G T C A A G T C A C G T
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:4
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----ACAGCAGCAC-
CCACACAGCAGGAGA
 A C G T A C G T A C G T A C G T C G T A G A T C C G T A A C T G T A G C C G T A C A T G A T G C G T C A A G T C A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Tcf12/MA0521.1/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAGCAC
AACAGCTGCAG
 A C G T C G T A G A T C C G T A A C T G T A G C C G T A C A T G A T G C G T C A A G T C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAGCAC
GACAGCTGCAG
 A C G T C G T A G A T C C G T A A C T G T A G C C G T A C A T G A T G C G T C A A G T C
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-ACAGCAGCAC
CACAGN-----
 A C G T C G T A G A T C C G T A A C T G T A G C C G T A C A T G A T G C G T C A A G T C
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAGCAC-
CACAGCAGGGGG
 A C G T C G T A G A T C C G T A A C T G T A G C C G T A C A T G A T G C G T C A A G T C A C G T
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----ACAGCAGCAC
NGNGACAGCTGCN-
 A C G T A C G T A C G T A C G T C G T A G A T C C G T A A C T G T A G C C G T A C A T G A T G C G T C A A G T C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ACAGCAGCAC
AACAGCTG---
 A C G T C G T A G A T C C G T A A C T G T A G C C G T A C A T G A T G C G T C A A G T C
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T