Information for 13-GGARAASYCCYTC (Motif 23)

A C T G C T A G C G T A C T G A C G T A C T G A A T G C G A C T A G T C A G T C A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A C T A G A C T G A C T G C T G A A T C G A G C T A C G T A G C T A C G T A G T C A G T C
p-value:1e-8
log p-value:-2.039e+01
Information Content per bp:1.869
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets65.5 +/- 24.7bp
Average Position of motif in Background36.5 +/- 13.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GGARAASYCCYTC
GGAAATCCCC---
 A C T G C T A G C G T A C T G A C G T A C T G A A T G C G A C T A G T C A G T C A G T C A C G T A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GGARAASYCCYTC
GGGAAATCCCCN-
 A C T G C T A G C G T A C T G A C G T A C T G A A T G C G A C T A G T C A G T C A G T C A C G T A G T C
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GGARAASYCCYTC
GGAAANCCCC---
 A C T G C T A G C G T A C T G A C G T A C T G A A T G C G A C T A G T C A G T C A G T C A C G T A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GGARAASYCCYTC
TGGAAAA-------
 A C G T A C T G C T A G C G T A C T G A C G T A C T G A A T G C G A C T A G T C A G T C A G T C A C G T A G T C
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGARAASYCCYTC
GGAAATTCCC---
 A C T G C T A G C G T A C T G A C G T A C T G A A T G C G A C T A G T C A G T C A G T C A C G T A G T C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GGARAASYCCYTC
GGAAATTCCC---
 A C T G C T A G C G T A C T G A C G T A C T G A A T G C G A C T A G T C A G T C A G T C A C G T A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGARAASYCCYTC
AGGGGAATCCCCT-
 A C G T A C T G C T A G C G T A C T G A C G T A C T G A A T G C G A C T A G T C A G T C A G T C A C G T A G T C
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGARAASYCCYTC
NATGGAAAAN------
 A C G T A C G T A C G T A C T G C T A G C G T A C T G A C G T A C T G A A T G C G A C T A G T C A G T C A G T C A C G T A G T C
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGARAASYCCYTC
AGGGGATTCCCCT-
 A C G T A C T G C T A G C G T A C T G A C G T A C T G A A T G C G A C T A G T C A G T C A G T C A C G T A G T C
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GGARAASYCCYTC
AATGGAAAAT------
 A C G T A C G T A C G T A C T G C T A G C G T A C T G A C G T A C T G A A T G C G A C T A G T C A G T C A G T C A C G T A G T C
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T