Information for 5-AGTTTTAATA (Motif 17)

C G T A A C T G C G A T A C G T G C A T C G A T C T G A C G T A A C G T C G T A
Reverse Opposite:
A C G T T C G A A C G T A G C T G C T A C G T A C G T A C G T A G T A C G A C T
p-value:1e-9
log p-value:-2.258e+01
Information Content per bp:1.834
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.68%
Number of Background Sequences with motif26.3
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets45.7 +/- 31.3bp
Average Position of motif in Background54.3 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0187.1_Tcf7_2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTTAATA---
NNNTTTNTAATACNG
 A C G T A C G T C G T A A C T G C G A T A C G T G C A T C G A T C T G A C G T A A C G T C G T A A C G T A C G T A C G T
C G A T C A G T C T A G C A G T C A G T C G A T T G C A A G C T G T C A C G T A C G A T C G T A G T A C T C A G C A T G

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.72
Offset:3
Orientation:reverse strand
Alignment:AGTTTTAATA
---TTTAAT-
 C G T A A C T G C G A T A C G T G C A T C G A T C T G A C G T A A C G T C G T A
A C G T A C G T A C G T G C A T A C G T A C G T C T G A C G T A A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGTTTTAATA
-ATTTGAATT
 C G T A A C T G C G A T A C G T G C A T C G A T C T G A C G T A A C G T C G T A
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T

PH0075.1_Hoxd10/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---AGTTTTAATA----
NTNAATTTTATTGNATT
 A C G T A C G T A C G T C G T A A C T G C G A T A C G T G C A T C G A T C T G A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:5
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTTAATA---
AGNGTTCTAATGANN
 A C G T A C G T C G T A A C T G C G A T A C G T G C A T C G A T C T G A C G T A A C G T C G T A A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

Arid3b/MA0601.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AGTTTTAATA--
-ATATTAATTAA
 C G T A A C T G C G A T A C G T G C A T C G A T C T G A C G T A A C G T C G T A A C G T A C G T
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AGTTTTAATA--
--TTTTATTRGN
 C G T A A C T G C G A T A C G T G C A T C G A T C T G A C G T A A C G T C G T A A C G T A C G T
A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A

PH0078.1_Hoxd13/Jaspar

Match Rank:8
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--AGTTTTAATA----
NNANTTTTATTGGNNN
 A C G T A C G T C G T A A C T G C G A T A C G T G C A T C G A T C T G A C G T A A C G T C G T A A C G T A C G T A C G T A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

PB0079.1_Sry_1/Jaspar

Match Rank:9
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AGTTTTAATA---
TATAATTATAATATTC
 A C G T A C G T A C G T C G T A A C T G C G A T A C G T G C A T C G A T C T G A C G T A A C G T C G T A A C G T A C G T A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

HOXD13/MA0909.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGTTTTAATA-
-NTTTTATTGG
 C G T A A C T G C G A T A C G T G C A T C G A T C T G A C G T A A C G T C G T A A C G T
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G