Information for 8-ACAAAAGCWGGAG (Motif 12)

C G T A A G T C C G T A C G T A C G T A C G T A A C T G A T G C C G A T C T A G C T A G C G T A A C T G
Reverse Opposite:
A G T C C G A T A G T C A G T C C G T A A T C G A G T C G A C T A C G T A C G T C G A T A C T G A C G T
p-value:1e-10
log p-value:-2.451e+01
Information Content per bp:1.829
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.3 +/- 27.9bp
Average Position of motif in Background44.6 +/- 21.7bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAAGCWGGAG
AAAACAAAGG------
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A C G T A A C T G A T G C C G A T C T A G C T A G C G T A A C T G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAAGCWGGAG
RACAAWGG------
 A C G T C G T A A G T C C G T A C G T A C G T A C G T A A C T G A T G C C G A T C T A G C T A G C G T A A C T G
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAAGCWGGAG
AACAAAGG------
 A C G T C G T A A G T C C G T A C G T A C G T A C G T A A C T G A T G C C G A T C T A G C T A G C G T A A C T G
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAAGCWGGAG
RNAACAATGG------
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A C G T A A C T G A T G C C G A T C T A G C T A G C G T A A C T G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--ACAAAAGCWGGAG
GAACAATGGN-----
 A C G T A C G T C G T A A G T C C G T A C G T A C G T A C G T A A C T G A T G C C G A T C T A G C T A G C G T A A C T G
C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAAGCWGGAG
VRRACAAWGG------
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A C G T A A C T G A T G C C G A T C T A G C T A G C G T A A C T G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ACAAAAGCWGGAG
RAACAATGGN-----
 A C G T A C G T C G T A A G T C C G T A C G T A C G T A C G T A A C T G A T G C C G A T C T A G C T A G C G T A A C T G
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------ACAAAAGCWGGAG
AGAAGAACAAAGGACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A C G T A A C T G A T G C C G A T C T A G C T A G C G T A A C T G
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAAGCWGGAG
GGAACAAAGR------
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A C G T A A C T G A T G C C G A T C T A G C T A G C G T A A C T G
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T

SPI1/MA0080.4/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:ACAAAAGCWGGAG--
-AAAAAGCGGAAGTA
 C G T A A G T C C G T A C G T A C G T A C G T A A C T G A T G C C G A T C T A G C T A G C G T A A C T G A C G T A C G T
A C G T T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A