Information for 6-TTTTCTCCTTGGA (Motif 10)

A C G T C G A T A G C T A C G T A T G C A G C T A G T C A G T C A G C T A G C T A C T G A C T G T G C A
Reverse Opposite:
A C G T G T A C A G T C C T G A C T G A A C T G C T A G C T G A A T C G T G C A C T G A C G T A C G T A
p-value:1e-11
log p-value:-2.579e+01
Information Content per bp:1.815
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.20%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets42.6 +/- 22.8bp
Average Position of motif in Background52.6 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:TTTTCTCCTTGGA
---TGACCTTGAN
 A C G T C G A T A G C T A C G T A T G C A G C T A G T C A G T C A G C T A G C T A C T G A C T G T G C A
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TTTTCTCCTTGGA
-BNTGDCCTTG--
 A C G T C G A T A G C T A C G T A T G C A G C T A G T C A G T C A G C T A G C T A C T G A C T G T G C A
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:TTTTCTCCTTGGA
---TGACCTTGAV
 A C G T C G A T A G C T A C G T A T G C A G C T A G T C A G T C A G C T A G C T A C T G A C T G T G C A
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTTTCTCCTTGGA---
-GCTGACCTTGAACTN
 A C G T C G A T A G C T A C G T A T G C A G C T A G T C A G T C A G C T A G C T A C T G A C T G T G C A A C G T A C G T A C G T
A C G T T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.57
Offset:2
Orientation:forward strand
Alignment:TTTTCTCCTTGGA
--NTGACCTTGA-
 A C G T C G A T A G C T A C G T A T G C A G C T A G T C A G T C A G C T A G C T A C T G A C T G T G C A
A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--TTTTCTCCTTGGA--
NNNNATGACCTTGANTN
 A C G T A C G T A C G T C G A T A G C T A C G T A T G C A G C T A G T C A G T C A G C T A G C T A C T G A C T G T G C A A C G T A C G T
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

ESRRB/MA0141.3/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TTTTCTCCTTGGA
-NATGACCTTGA-
 A C G T C G A T A G C T A C G T A T G C A G C T A G T C A G T C A G C T A G C T A C T G A C T G T G C A
A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TTTTCTCCTTGGA-
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T C G A T A G C T A C G T A T G C A G C T A G T C A G T C A G C T A G C T A C T G A C T G T G C A A C G T
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TTTTCTCCTTGGA--
---TGACCTTGACCT
 A C G T C G A T A G C T A C G T A T G C A G C T A G T C A G T C A G C T A G C T A C T G A C T G T G C A A C G T A C G T
A C G T A C G T A C G T G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TTTTCTCCTTGGA
--CTGACCTTTG-
 A C G T C G A T A G C T A C G T A T G C A G C T A G T C A G T C A G C T A G C T A C T G A C T G T G C A
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T