Information for 3-CCCCTCACAGGGA (Motif 6)

A G T C A G T C A G T C G A T C A C G T A T G C C G T A A G T C C G T A A T C G A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A T G C A C G T A C T G A C G T A T C G C G T A C A T G A C T G C T A G A C T G
p-value:1e-10
log p-value:-2.515e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 28.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

INSM1/MA0155.1/Jaspar

Match Rank:1
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTCACAGGGA
CGCCCCCTGACA----
 A C G T A C G T A C G T A G T C A G T C A G T C G A T C A C G T A T G C C G T A A G T C C G T A A T C G A C T G A C T G C G T A
G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A A C G T A C G T A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:2
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCCCTCACAGGGA
CCCCCCCCAC-----
 A C G T A C G T A G T C A G T C A G T C G A T C A C G T A T G C C G T A A G T C C G T A A T C G A C T G A C T G C G T A
T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:3
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CCCCTCACAGGGA
-----CACAGN--
 A G T C A G T C A G T C G A T C A C G T A T G C C G T A A G T C C G T A A T C G A C T G A C T G C G T A
A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:4
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTCACAGGGA
TTCCCCCTAC------
 A C G T A C G T A C G T A G T C A G T C A G T C G A T C A C G T A T G C C G T A A G T C C G T A A T C G A C T G A C T G C G T A
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

GLIS2/MA0736.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCCCTCACAGGGA
GACCCCCCGCGAAG-
 A C G T A C G T A G T C A G T C A G T C G A T C A C G T A T G C C G T A A G T C C G T A A T C G A C T G A C T G C G T A
A C T G T C G A A G T C G T A C G A T C G T A C G T A C G A T C C T A G A G T C C T A G C T G A G T C A A T C G A C G T

PB0025.1_Glis2_1/Jaspar

Match Rank:6
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------CCCCTCACAGGGA
TATCGACCCCCCACAG---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C G A T C A C G T A T G C C G T A A G T C C G T A A T C G A C T G A C T G C G T A
G A C T G C T A G C A T T A G C A C T G T G C A A G T C A G T C G A T C G A T C G A T C G A T C T G C A A G T C C T G A C A T G A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CCCCTCACAGGGA----
-CAATCACTGGCAGAAT
 A G T C A G T C A G T C G A T C A C G T A T G C C G T A A G T C C G T A A T C G A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A G T C G C T A T C G A G C A T G T A C C T G A T G A C C G A T A C T G A C T G A G T C C T G A C T A G G C T A C G T A C G A T

GLIS3/MA0737.1/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCCCTCACAGGGA
GACCCCCCACGAAG-
 A C G T A C G T A G T C A G T C A G T C G A T C A C G T A T G C C G T A A G T C C G T A A T C G A C T G A C T G C G T A
A C T G T C G A A G T C A G T C G A T C A G T C G T A C A G T C C T G A A G T C C T A G C G T A G T C A A T C G A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CCCCTCACAGGGA--
-----AACAGGAAGT
 A G T C A G T C A G T C G A T C A C G T A T G C C G T A A G T C C G T A A T C G A C T G A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:10
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCCCTCACAGGGA
---GTCACGTGGM
 A G T C A G T C A G T C G A T C A C G T A T G C C G T A A G T C C G T A A T C G A C T G A C T G C G T A
A C G T A C G T A C G T T C A G C A G T A G T C C G T A A T G C T C A G G C A T A C T G A C T G T G A C