Information for 5-GCCTTATTTT (Motif 11)

T A C G T G A C G A T C G A C T G A C T T G C A C G A T A C G T A C G T G C A T
Reverse Opposite:
C G T A C G T A C G T A G C T A A C G T C T G A C T G A C T A G A C T G A T G C
p-value:1e-9
log p-value:-2.296e+01
Information Content per bp:1.694
Number of Target Sequences with motif61.0
Percentage of Target Sequences with motif7.40%
Number of Background Sequences with motif1414.0
Percentage of Background Sequences with motif2.94%
Average Position of motif in Targets49.3 +/- 23.5bp
Average Position of motif in Background49.6 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:GCCTTATTTT----
--KCTATTTTTRGH
 T A C G T G A C G A T C G A C T G A C T T G C A C G A T A C G T A C G T G C A T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCCTTATTTT---
---CTATTTTTGG
 T A C G T G A C G A T C G A C T G A C T T G C A C G A T A C G T A C G T G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCCTTATTTT------
-TTCTATTTTTAGNNN
 T A C G T G A C G A T C G A C T G A C T T G C A C G A T A C G T A C G T G C A T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

GATA3/MA0037.2/Jaspar

Match Rank:4
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GCCTTATTTT
-TCTTATCT-
 T A C G T G A C G A T C G A C T G A C T T G C A C G A T A C G T A C G T G C A T
A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:GCCTTATTTT----
--GCTATTTTTGGM
 T A C G T G A C G A T C G A C T G A C T T G C A C G A T A C G T A C G T G C A T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GCCTTATTTT----
--GCTATTTTTAGC
 T A C G T G A C G A T C G A C T G A C T T G C A C G A T A C G T A C G T G C A T A C G T A C G T A C G T A C G T
A C G T A C G T C A T G A G T C A G C T C G T A C G A T C G A T G C A T G C A T C G A T C T G A C A T G T G A C

PH0152.1_Pou6f1_2/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCCTTATTTT----
GCAACCTCATTATNNNN
 A C G T A C G T A C G T T A C G T G A C G A T C G A C T G A C T T G C A C G A T A C G T A C G T G C A T A C G T A C G T A C G T A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCCTTATTTT--
-TCTTATCTCCC
 T A C G T G A C G A T C G A C T G A C T T G C A C G A T A C G T A C G T G C A T A C G T A C G T
A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTATTTT
TGACCTARTT-
 A C G T T A C G T G A C G A T C G A C T G A C T T G C A C G A T A C G T A C G T G C A T
A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer

Match Rank:10
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:GCCTTATTTT
NCCTTATCTG
 T A C G T G A C G A T C G A C T G A C T T G C A C G A T A C G T A C G T G C A T
A G C T A G T C A T G C A C G T A C G T C G T A A C G T A G T C C G A T A T C G