Information for 1-AGGTAATTCAGGGTGR (Motif 1)

C T G A A C T G A T C G C G A T G T C A C G T A C G A T A C G T G T A C C G T A A C T G A C T G T A C G C G A T A C T G T C A G
Reverse Opposite:
A G T C A G T C C G T A A G T C G T A C G T A C C G A T A C T G C G T A C G T A C G A T A C G T G C T A A T G C A G T C A G C T
p-value:1e-16
log p-value:-3.704e+01
Information Content per bp:1.753
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.85%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.1 +/- 16.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0024.1_Dlx5/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AGGTAATTCAGGGTGR
GGGGTAATTAGCTCTG-
 A C G T C T G A A C T G A T C G C G A T G T C A C G T A C G A T A C G T G T A C C G T A A C T G A C T G T A C G C G A T A C T G T C A G
A T C G A T C G T C A G T C A G G A C T G T C A C G T A G A C T C A G T C T G A T A C G A G T C A C G T T G A C A C G T A T C G A C G T

PH0053.1_Hoxa6/Jaspar

Match Rank:2
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGGTAATTCAGGGTGR
NTNAGGTAATTACCTT---
 A C G T A C G T A C G T C T G A A C T G A T C G C G A T G T C A C G T A C G A T A C G T G T A C C G T A A C T G A C T G T A C G C G A T A C T G T C A G
G T C A C G A T C A G T C T G A C T A G A C T G G A C T G T C A G C T A C A G T C A G T C T G A G T A C G A T C C A G T A G C T A C G T A C G T A C G T

PH0008.1_Barx2/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AGGTAATTCAGGGTGR
TAAGTAATTAGTTATA-
 A C G T C T G A A C T G A T C G C G A T G T C A C G T A C G A T A C G T G T A C C G T A A C T G A C T G T A C G C G A T A C T G T C A G
C G A T G C T A T C G A A C T G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A G C T A C G T C T G A G A C T C T G A A C G T

PH0072.1_Hoxc8/Jaspar

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGGTAATTCAGGGTGR
TTGGGGTAATTAACGT---
 A C G T A C G T A C G T C T G A A C T G A T C G C G A T G T C A C G T A C G A T A C G T G T A C C G T A A C T G A C T G T A C G C G A T A C T G T C A G
A C G T G C A T C A T G C T A G C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A G T C A A G T C C A T G A C G T A C G T A C G T A C G T

PH0103.1_Meox1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-AGGTAATTCAGGGTGR
GAGGTAATTACCTCAG-
 A C G T C T G A A C T G A T C G C G A T G T C A C G T A C G A T A C G T G T A C C G T A A C T G A C T G T A C G C G A T A C T G T C A G
T C A G T G C A C A T G C A T G G A C T T G C A G C T A C A G T A C G T C T G A A T G C G T A C G A C T A G T C C G T A C T A G A C G T

PB0031.1_Hoxa3_1/Jaspar

Match Rank:6
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGGTAATTCAGGGTGR
TGGAGGTAATTAAC-----
 A C G T A C G T A C G T C T G A A C T G A T C G C G A T G T C A C G T A C G A T A C G T G T A C C G T A A C T G A C T G T A C G C G A T A C T G T C A G
C A G T A C T G A T C G G C T A C T A G A T C G G A C T G T C A C G T A A C G T A C G T C T G A T C G A A G T C A C G T A C G T A C G T A C G T A C G T

PH0020.1_Dlx1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGGTAATTCAGGGTGR
CTGAGGTAATTAAT-----
 A C G T A C G T A C G T C T G A A C T G A T C G C G A T G T C A C G T A C G A T A C G T G T A C C G T A A C T G A C T G T A C G C G A T A C T G T C A G
A G T C A G C T C T A G T G C A C T A G C T A G G A C T T C G A C G T A C G A T A C G T C T G A C G T A A G C T A C G T A C G T A C G T A C G T A C G T

PH0074.1_Hoxd1/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AGGTAATTCAGGGTGR
NNNAGCTAATTAGCTTA--
 A C G T A C G T A C G T C T G A A C T G A T C G C G A T G T C A C G T A C G A T A C G T G T A C C G T A A C T G A C T G T A C G C G A T A C T G T C A G
C G A T G T C A G T A C T G C A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G C T C G A T A G C T G C T A A C G T A C G T

PH0022.1_Dlx3/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AGGTAATTCAGGGTGR
NNNGGTAATTATNGNGN-
 A C G T A C G T C T G A A C T G A T C G C G A T G T C A C G T A C G A T A C G T G T A C C G T A A C T G A C T G T A C G C G A T A C T G T C A G
C A T G C G A T A T G C C A T G T C A G G A C T G C T A C G T A A C G T C G A T C T G A G A C T G T A C A C T G A G T C C A T G T G C A A C G T

MEOX2/MA0706.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGGTAATTCAGGGTGR
-AGTAATTAAC-----
 C T G A A C T G A T C G C G A T G T C A C G T A C G A T A C G T G T A C C G T A A C T G A C T G T A C G C G A T A C T G T C A G
A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C A C G T A C G T A C G T A C G T A C G T