Information for 1-AAAGCCAGTT (Motif 7)

C G T A G T C A C G T A T C A G A G T C A G T C C G T A C T A G G A C T A G C T
Reverse Opposite:
C T G A C G T A A G T C C G A T A C T G T C A G A G T C C G A T A C G T A C G T
p-value:1e-12
log p-value:-2.873e+01
Information Content per bp:1.835
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.27%
Number of Background Sequences with motif49.1
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets54.4 +/- 27.8bp
Average Position of motif in Background54.7 +/- 26.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GRHL1/MA0647.1/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:forward strand
Alignment:AAAGCCAGTT--
AAAACCGGTTTT
 C G T A G T C A C G T A T C A G A G T C A G T C C G T A C T A G G A C T A G C T A C G T A C G T
G T C A C G T A C T G A C G T A A G T C G T A C C T A G A T C G G C A T G A C T G C A T C G A T

Myb/MA0100.2/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:AAAGCCAGTT--
--TGGCAGTTGN
 C G T A G T C A C G T A T C A G A G T C A G T C C G T A C T A G G A C T A G C T A C G T A C G T
A C G T A C G T C G A T A C T G C T A G A G T C C G T A A C T G A G C T A C G T C T A G T C A G

TFCP2/MA0145.3/Jaspar

Match Rank:3
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAAGCCAGTT-
-AAACCGGTTT
 C G T A G T C A C G T A T C A G A G T C A G T C C G T A C T A G G A C T A G C T A C G T
A C G T T C G A C G T A C G T A T A G C G A T C C T A G A T C G G C A T G A C T G A C T

PH0005.1_Barhl1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAAGCCAGTT-----
AACAACCAATTAATTC
 A C G T C G T A G T C A C G T A T C A G A G T C A G T C C G T A C T A G G A C T A G C T A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G T A C T C G A C T G A A T G C G A T C C T G A G C T A A C G T G A C T C G T A C T G A A C G T C G A T G A T C

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAAGCCAGTT-
-ATGCCAGACN
 C G T A G T C A C G T A T C A G A G T C A G T C C G T A C T A G G A C T A G C T A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

Nr2e1/MA0676.1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAAGCCAGTT
AAAAGTCAA--
 A C G T C G T A G T C A C G T A T C A G A G T C A G T C C G T A C T A G G A C T A G C T
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T

PH0006.1_Barhl2/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAAGCCAGTT-----
AAAAACCAATTAAGAA
 A C G T C G T A G T C A C G T A T C A G A G T C A G T C C G T A C T A G G A C T A G C T A C G T A C G T A C G T A C G T A C G T
G T C A G T C A G T C A C T G A T C G A G A T C A G T C C T G A G C T A A C G T A C G T C G T A C T G A A T C G G C T A G C T A

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAAGCCAGTT-----
NNNTGGCAGTTGGTNN
 A C G T C G T A G T C A C G T A T C A G A G T C A G T C C G T A C T A G G A C T A G C T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C T C G A G A C T C T A G C T A G A G T C C T G A A C T G A C G T G A C T C T A G T C A G C A G T G T A C T A C G

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAAGCCAGTT--
--TGGCAGTTGG
 C G T A G T C A C G T A T C A G A G T C A G T C C G T A C T A G G A C T A G C T A C G T A C G T
A C G T A C G T G A C T C T A G C T A G A G T C T G C A A C T G A C G T A C G T C T A G T C A G

PH0115.1_Nkx2-6/Jaspar

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:AAAGCCAGTT------
TAAGCCACTTAACATT
 C G T A G T C A C G T A T C A G A G T C A G T C C G T A C T A G G A C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T