Information for 16-GCAAAGTAAAGAA (Motif 30)

A T C G T A G C C G T A C G T A C G T A A C T G A C G T G T C A C G T A C G T A A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C T G A T G C
p-value:1e-7
log p-value:-1.754e+01
Information Content per bp:1.914
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.8 +/- 27.5bp
Average Position of motif in Background56.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:1
Score:0.73
Offset:2
Orientation:forward strand
Alignment:GCAAAGTAAAGAA
--AAAGTAAACA-
 A T C G T A G C C G T A C G T A C G T A A C T G A C G T G T C A C G T A C G T A A C T G C G T A C G T A
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:2
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GCAAAGTAAAGAA----
AAAAAGTAAACAAAGAC
 A T C G T A G C C G T A C G T A C G T A A C T G A C G T G T C A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GCAAAGTAAAGAA
--AAAGTAAACA-
 A T C G T A G C C G T A C G T A C G T A A C T G A C G T G T C A C G T A C G T A A C T G C G T A C G T A
A C G T A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXC2/MA0846.1/Jaspar

Match Rank:4
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GCAAAGTAAAGAA-
--TAAGTAAACAAA
 A T C G T A G C C G T A C G T A C G T A A C T G A C G T G T C A C G T A C G T A A C T G C G T A C G T A A C G T
A C G T A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A

FOXA1/MA0148.3/Jaspar

Match Rank:5
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GCAAAGTAAAGAA---
-CAAAGTAAACANNNN
 A T C G T A G C C G T A C G T A C G T A A C T G A C G T G T C A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T
A C G T G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:GCAAAGTAAAGAA
NCTAAGTAAACA-
 A T C G T A G C C G T A C G T A C G T A A C T G A C G T G T C A C G T A C G T A A C T G C G T A C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:7
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCAAAGTAAAGAA----
AAAAAGTAAACAAACAC
 A T C G T A G C C G T A C G T A C G T A A C T G A C G T G T C A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GCAAAGTAAAGAA----
AAAAAGTAAACAAACAC
 A T C G T A G C C G T A C G T A C G T A A C T G A C G T G T C A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:9
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:GCAAAGTAAAGAA--
NCWRWGTAAACANSV
 A T C G T A G C C G T A C G T A C G T A A C T G A C G T G T C A C G T A C G T A A C T G C G T A C G T A A C G T A C G T
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Foxk1/MA0852.1/Jaspar

Match Rank:10
Score:0.70
Offset:0
Orientation:forward strand
Alignment:GCAAAGTAAAGAA----
AAAATGTAAACAAACAG
 A T C G T A G C C G T A C G T A C G T A A C T G A C G T G T C A C G T A C G T A A C T G C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G