Information for 8-AGTGACTTGC (Motif 28)

C G T A T A C G A C G T A C T G T C G A A G T C C A G T G A C T T C A G A G T C
Reverse Opposite:
C T A G A G T C C G T A G C T A A C T G A G C T G T A C C G T A A G T C C G A T
p-value:1e-8
log p-value:-1.999e+01
Information Content per bp:1.823
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif34.5
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets52.7 +/- 26.6bp
Average Position of motif in Background49.0 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax2/MA0067.1/Jaspar

Match Rank:1
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-AGTGACTTGC
NCGTGACN---
 A C G T C G T A T A C G A C G T A C T G T C G A A G T C C A G T G A C T T C A G A G T C
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AGTGACTTGC--
AGAAATGACTTCCCT
 A C G T A C G T A C G T C G T A T A C G A C G T A C T G T C G A A G T C C A G T G A C T T C A G A G T C A C G T A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AGTGACTTGC---
--NNACTTGCCTT
 C G T A T A C G A C G T A C T G T C G A A G T C C A G T G A C T T C A G A G T C A C G T A C G T A C G T
A C G T A C G T T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:4
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AGTGACTTGC
-TTGACTTTT
 C G T A T A C G A C G T A C T G T C G A A G T C C A G T G A C T T C A G A G T C
A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:AGTGACTTGC
--TGACGT--
 C G T A T A C G A C G T A C T G T C G A A G T C C A G T G A C T T C A G A G T C
A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AGTGACTTGC
TGAGTGACAGSC
 A C G T A C G T C G T A T A C G A C G T A C T G T C G A A G T C C A G T G A C T T C A G A G T C
C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

Atf1/MA0604.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGTGACTTGC
-ATGACGTA-
 C G T A T A C G A C G T A C T G T C G A A G T C C A G T G A C T T C A G A G T C
A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGTGACTTGC
-GTGACCTT-
 C G T A T A C G A C G T A C T G T C G A A G T C C A G T G A C T T C A G A G T C
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

CREB3/MA0638.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGTGACTTGC---
NGATGACGTGGCAN
 A C G T C G T A T A C G A C G T A C T G T C G A A G T C C A G T G A C T T C A G A G T C A C G T A C G T A C G T
A G C T C A T G T C G A G A C T A C T G C G T A G A T C A C T G C G A T A T C G C A T G G T A C T C G A A G T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGTGACTTGC
TTRAGTGSYK---
 A C G T A C G T A C G T C G T A T A C G A C G T A C T G T C G A A G T C C A G T G A C T T C A G A G T C
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T