Information for 9-AGAGGAGAGGAGAGGA (Motif 27)

C G T A A C T G G T C A A C T G A T C G C T G A A C T G G T C A C T A G A C T G C G T A A T C G C G T A A T C G C T A G C T G A
Reverse Opposite:
A G C T A G T C A T G C A C G T A T G C A C G T A G T C A G T C A C G T A G T C A G C T A T G C G T A C A C G T A G T C A C G T
p-value:1e-9
log p-value:-2.097e+01
Information Content per bp:1.849
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets62.4 +/- 24.5bp
Average Position of motif in Background80.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:1
Score:0.53
Offset:0
Orientation:forward strand
Alignment:AGAGGAGAGGAGAGGA
AGATGKDGAGATAAG-
 C G T A A C T G G T C A A C T G A T C G C T G A A C T G G T C A C T A G A C T G C G T A A T C G C G T A A T C G C T A G C T G A
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:2
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--AGAGGAGAGGAGAGGA
NNTNNGGGGCGGNGNGN-
 A C G T A C G T C G T A A C T G G T C A A C T G A T C G C T G A A C T G G T C A C T A G A C T G C G T A A T C G C G T A A T C G C T A G C T G A
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-AGAGGAGAGGAGAGGA
TAGGGCAAAGGTCA---
 A C G T C G T A A C T G G T C A A C T G A T C G C T G A A C T G G T C A C T A G A C T G C G T A A T C G C G T A A T C G C T A G C T G A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A A C G T A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:4
Score:0.48
Offset:3
Orientation:reverse strand
Alignment:AGAGGAGAGGAGAGGA
---GTGGGGGAGGGG-
 C G T A A C T G G T C A A C T G A T C G C T G A A C T G G T C A C T A G A C T G C G T A A T C G C G T A A T C G C T A G C T G A
A C G T A C G T A C G T C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:AGAGGAGAGGAGAGGA
----GGGAGGACNG--
 C G T A A C T G G T C A A C T G A T C G C T G A A C T G G T C A C T A G A C T G C G T A A T C G C G T A A T C G C T A G C T G A
A C G T A C G T A C G T A C G T C T A G A C T G A C T G C G T A A C T G A T C G C G T A A T G C A G C T T A C G A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:6
Score:0.48
Offset:-5
Orientation:forward strand
Alignment:-----AGAGGAGAGGAGAGGA
TGCGCATAGGGGAGGAG----
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G G T C A A C T G A T C G C T G A A C T G G T C A C T A G A C T G C G T A A T C G C G T A A T C G C T A G C T G A
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G A C G T A C G T A C G T A C G T

SPIB/MA0081.1/Jaspar

Match Rank:7
Score:0.48
Offset:10
Orientation:forward strand
Alignment:AGAGGAGAGGAGAGGA-
----------AGAGGAA
 C G T A A C T G G T C A A C T G A T C G C T G A A C T G G T C A C T A G A C T G C G T A A T C G C G T A A T C G C T A G C T G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G T G C A C T A G C A T G C G T A C G T A

SP1/MA0079.3/Jaspar

Match Rank:8
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:AGAGGAGAGGAGAGGA
--GGGGGCGGGGC---
 C G T A A C T G G T C A A C T G A T C G C T G A A C T G G T C A C T A G A C T G C G T A A T C G C G T A A T C G C T A G C T G A
A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C A C G T A C G T A C G T

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.47
Offset:-2
Orientation:forward strand
Alignment:--AGAGGAGAGGAGAGGA
GTAGGGCAAAGGTCA---
 A C G T A C G T C G T A A C T G G T C A A C T G A T C G C T G A A C T G G T C A C T A G A C T G C G T A A T C G C G T A A T C G C T A G C T G A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.46
Offset:1
Orientation:forward strand
Alignment:AGAGGAGAGGAGAGGA
-RGKGGGCGGAGC---
 C G T A A C T G G T C A A C T G A T C G C T G A A C T G G T C A C T A G A C T G C G T A A T C G C G T A A T C G C T A G C T G A
A C G T C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T