Information for 9-CTTCCTGSAGGRV (Motif 19)

T A G C A G C T A G C T A G T C G A T C C A G T A C T G T A C G C G T A C T A G T C A G C T G A T C G A
Reverse Opposite:
A G C T G A C T A G T C G A T C G C A T A T G C T A G C G T C A C T A G T C A G T C G A T C G A A T C G
p-value:1e-9
log p-value:-2.204e+01
Information Content per bp:1.562
Number of Target Sequences with motif149.0
Percentage of Target Sequences with motif17.82%
Number of Background Sequences with motif2237.9
Percentage of Background Sequences with motif10.61%
Average Position of motif in Targets47.9 +/- 23.8bp
Average Position of motif in Background49.8 +/- 26.3bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CTTCCTGSAGGRV
CCCCCTGCTGTG-
 T A G C A G C T A G C T A G T C G A T C C A G T A C T G T A C G C G T A C T A G T C A G C T G A T C G A
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTTCCTGSAGGRV
GGCCYCCTGCTGDGH
 A C G T A C G T T A G C A G C T A G C T A G T C G A T C C A G T A C T G T A C G C G T A C T A G T C A G C T G A T C G A
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.66
Offset:-8
Orientation:forward strand
Alignment:--------CTTCCTGSAGGRV
CNNBRGCGCCCCCTGSTGGC-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G C T A G C T A G T C G A T C C A G T A C T G T A C G C G T A C T A G T C A G C T G A T C G A
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CTTCCTGSAGGRV
ACATCCTGNT----
 A C G T T A G C A G C T A G C T A G T C G A T C C A G T A C T G T A C G C G T A C T A G T C A G C T G A T C G A
C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T A C G T A C G T A C G T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCTGSAGGRV
ACTTCCTGBT----
 A C G T T A G C A G C T A G C T A G T C G A T C C A G T A C T G T A C G C G T A C T A G T C A G C T G A T C G A
C T G A A G T C A C G T A C G T A G T C A G T C A C G T A T C G A T C G G C A T A C G T A C G T A C G T A C G T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CTTCCTGSAGGRV
ACTTCCTGNT----
 A C G T T A G C A G C T A G C T A G T C G A T C C A G T A C T G T A C G C G T A C T A G T C A G C T G A T C G A
C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A C T G G C A T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CTTCCTGSAGGRV
CACTTCCTGT-----
 A C G T A C G T T A G C A G C T A G C T A G T C G A T C C A G T A C T G T A C G C G T A C T A G T C A G C T G A T C G A
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CTTCCTGSAGGRV--
TTTCCTGGAAAGNNN
 T A G C A G C T A G C T A G T C G A T C C A G T A C T G T A C G C G T A C T A G T C A G C T G A T C G A A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTTCCTGSAGGRV
CACTTCCTGT-----
 A C G T A C G T T A G C A G C T A G C T A G T C G A T C C A G T A C T G T A C G C G T A C T A G T C A G C T G A T C G A
A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T A C G T

CTCF/MA0139.1/Jaspar

Match Rank:10
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----CTTCCTGSAGGRV-
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A C G T A C G T T A G C A G C T A G C T A G T C G A T C C A G T A C T G T A C G C G T A C T A G T C A G C T G A T C G A A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A