Information for 5-ATTGCCCTCT (Motif 17)

C T G A A C G T C G A T A C T G A G T C G T A C A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G A C T G C T A G A G T C C G T A C G T A A G C T
p-value:1e-9
log p-value:-2.252e+01
Information Content per bp:1.930
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.32%
Number of Background Sequences with motif17.1
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets45.3 +/- 30.5bp
Average Position of motif in Background54.5 +/- 24.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ATTGCCCTCT
--TGACCTYA
 C T G A A C G T C G A T A C T G A G T C G T A C A G T C A C G T A G T C A C G T
A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:ATTGCCCTCT
--TGACCYCT
 C T G A A C G T C G A T A C T G A G T C G T A C A G T C A C G T A G T C A C G T
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ATTGCCCTCT----
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T C T G A A C G T C G A T A C T G A G T C G T A C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

PB0030.1_Hnf4a_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ATTGCCCTCT----
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T C T G A A C G T C G A T A C T G A G T C G T A C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATTGCCCTCT-
-CTGACCTTTG
 C T G A A C G T C G A T A C T G A G T C G T A C A G T C A C G T A G T C A C G T A C G T
A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

NR2F1/MA0017.2/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATTGCCCTCT-
CNNTTGACCTTTG
 A C G T A C G T C T G A A C G T C G A T A C T G A G T C G T A C A G T C A C G T A G T C A C G T A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

Sox17/MA0078.1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---ATTGCCCTCT
CTCATTGTC----
 A C G T A C G T A C G T C T G A A C G T C G A T A C T G A G T C G T A C A G T C A C G T A G T C A C G T
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--ATTGCCCTCT----
NNNNTGACCTTTNNNN
 A C G T A C G T C T G A A C G T C G A T A C T G A G T C G T A C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATTGCCCTCT-------
--TGACCTTTGCCCTAN
 C T G A A C G T C G A T A C T G A G T C G T A C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATTGCCCTCT------
--TGACCTTTGCCCTA
 C T G A A C G T C G A T A C T G A G T C G T A C A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A