Information for 6-AAGGGTGGCC (Motif 20)

C T G A C T G A C T A G A C T G C A T G G A C T A C T G A T C G A G T C A T G C
Reverse Opposite:
A T C G A C T G A T G C A G T C C T G A G T A C A G T C G A T C A G C T A G C T
p-value:1e-8
log p-value:-1.860e+01
Information Content per bp:1.841
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif73.2
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets53.7 +/- 28.2bp
Average Position of motif in Background50.2 +/- 24.2bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--AAGGGTGGCC----
NGTAGGTTGGCATNNN
 A C G T A C G T C T G A C T G A C T A G A C T G C A T G G A C T A C T G A T C G A G T C A T G C A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--AAGGGTGGCC-----
NNANTGGTGGTCTTNNN
 A C G T A C G T C T G A C T G A C T A G A C T G C A T G G A C T A C T G A T C G A G T C A T G C A C G T A C G T A C G T A C G T A C G T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G

Hic1/MA0739.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAGGGTGGCC-
--GGTTGGCAT
 C T G A C T G A C T A G A C T G C A T G G A C T A C T G A T C G A G T C A T G C A C G T
A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AAGGGTGGCC--
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G C A T G G A C T A C T G A T C G A G T C A T G C A C G T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-AAGGGTGGCC-
CGTGGGTGGTCC
 A C G T C T G A C T G A C T A G A C T G C A T G G A C T A C T G A T C G A G T C A T G C A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-AAGGGTGGCC
TAATGGCGGNC
 A C G T C T G A C T G A C T A G A C T G C A T G G A C T A C T G A T C G A G T C A T G C
G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

GLI2/MA0734.1/Jaspar

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGGGTGGCC--
CAGTGTGGTCGC
 C T G A C T G A C T A G A C T G C A T G G A C T A C T G A T C G A G T C A T G C A C G T A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:AAGGGTGGCC-------
NAGANTGGCGGGGNGNA
 C T G A C T G A C T A G A C T G C A T G G A C T A C T G A T C G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AAGGGTGGCC---
NNVDGGGYGGGGCYN
 A C G T A C G T C T G A C T G A C T A G A C T G C A T G G A C T A C T G A T C G A G T C A T G C A C G T A C G T A C G T
T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--AAGGGTGGCC-----
NNNAAGGGGGCGGGNNN
 A C G T A C G T C T G A C T G A C T A G A C T G C A T G G A C T A C T G A T C G A G T C A T G C A C G T A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C