Information for 5-CCGATTCAGA (Motif 18)

A G T C G A T C C T A G G T C A A G C T A C G T A G T C G C T A A C T G C T G A
Reverse Opposite:
A G C T A G T C C A G T C T A G C G T A C T G A A C G T G A T C C T A G A C T G
p-value:1e-8
log p-value:-1.996e+01
Information Content per bp:1.848
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.99%
Number of Background Sequences with motif19.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets47.8 +/- 28.5bp
Average Position of motif in Background43.1 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CCGATTCAGA----
GACCACATTCATACAAT
 A C G T A C G T A C G T A G T C G A T C C T A G G T C A A G C T A C G T A G T C G C T A A C T G C T G A A C G T A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCGATTCAGA-
GCTGASTCAGCA
 A C G T A G T C G A T C C T A G G T C A A G C T A C G T A G T C G C T A A C T G C T G A A C G T
T C A G T A G C G A C T C A T G C T G A A T C G G C A T G T A C C G T A A C T G T A G C T G C A

LIN54/MA0619.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CCGATTCAGA-
--NATTCAAAT
 A G T C G A T C C T A G G T C A A G C T A C G T A G T C G C T A A C T G C T G A A C G T
A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCGATTCAGA
CGGTTTCAAA
 A G T C G A T C C T A G G T C A A G C T A C G T A G T C G C T A A C T G C T G A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CCGATTCAGA
TGCTGAGTCA--
 A C G T A C G T A G T C G A T C C T A G G T C A A G C T A C G T A G T C G C T A A C T G C T G A
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCGATTCAGA-----
-ACATTCATGACACG
 A G T C G A T C C T A G G T C A A G C T A C G T A G T C G C T A A C T G C T G A A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

VENTX/MA0724.1/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCGATTCAGA
ACCGATTAG--
 A C G T A G T C G A T C C T A G G T C A A G C T A C G T A G T C G C T A A C T G C T G A
C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CCGATTCAGA
CGGATTAN--
 A G T C G A T C C T A G G T C A A G C T A C G T A G T C G C T A A C T G C T G A
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T

FOS::JUN/MA0099.2/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCGATTCAGA
-TGAGTCA--
 A G T C G A T C C T A G G T C A A G C T A C G T A G T C G C T A A C T G C T G A
A C G T G A C T A T C G G C T A A C T G A C G T G T A C C T G A A C G T A C G T

MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CCGATTCAGA------
WNTGCTGASTCAGCANWTTY
 A C G T A C G T A C G T A C G T A G T C G A T C C T A G G T C A A G C T A C G T A G T C G C T A A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A G A C T C G A T A T C G G T A C G C A T C A T G C G T A T A C G G C A T G T A C C G T A C A T G A T G C G C T A C T A G G C A T G C A T G C A T G A C T