Information for 6-VGCCCCTCCGGGG (Motif 20)

T G C A C T A G G A T C A T G C A G T C A G T C A C G T A G T C A G T C A T C G C T A G A T C G C T A G
Reverse Opposite:
G A T C T A G C A G T C A T G C A C T G A C T G G T C A A C T G T C A G A T C G C T A G A G T C A C G T
p-value:1e-7
log p-value:-1.750e+01
Information Content per bp:1.741
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif93.8
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets53.1 +/- 27.0bp
Average Position of motif in Background45.1 +/- 30.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:VGCCCCTCCGGGG---
-NCCCCCCCGGGGGGN
 T G C A C T A G G A T C A T G C A G T C A G T C A C G T A G T C A G T C A T C G C T A G A T C G C T A G A C G T A C G T A C G T
A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0101.1_Zic1_1/Jaspar

Match Rank:2
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:VGCCCCTCCGGGG---
--CCCCCCCGGGGGNN
 T G C A C T A G G A T C A T G C A G T C A G T C A C G T A G T C A G T C A T C G C T A G A T C G C T A G A C G T A C G T A C G T
A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0102.1_Zic2_1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:VGCCCCTCCGGGG---
-ACCCCCCCGGGGGGN
 T G C A C T A G G A T C A T G C A G T C A G T C A C G T A G T C A G T C A T C G C T A G A T C G C T A G A C G T A C G T A C G T
A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

KLF5/MA0599.1/Jaspar

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:VGCCCCTCCGGGG
-GCCCCGCCCC--
 T G C A C T A G G A T C A T G C A G T C A G T C A C G T A G T C A G T C A T C G C T A G A T C G C T A G
A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:VGCCCCTCCGGGG--
ATTCCCTGAGGGGAA
 T G C A C T A G G A T C A T G C A G T C A G T C A C G T A G T C A G T C A T C G C T A G A T C G C T A G A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:VGCCCCTCCGGGG--
NTCGCCTCAGGCAAT
 T G C A C T A G G A T C A T G C A G T C A G T C A C G T A G T C A G T C A T C G C T A G A T C G C T A G A C G T A C G T
G C A T C G A T G A T C A T C G G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A G C C T G A C G T A C G A T

SP1/MA0079.3/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:VGCCCCTCCGGGG
-GCCCCGCCCCC-
 T G C A C T A G G A T C A T G C A G T C A G T C A C G T A G T C A G T C A T C G C T A G A T C G C T A G
A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C A C G T

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.61
Offset:4
Orientation:forward strand
Alignment:VGCCCCTCCGGGG
----GCTCCG---
 T G C A C T A G G A T C A T G C A G T C A G T C A C G T A G T C A G T C A T C G C T A G A T C G C T A G
A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T

PB0204.1_Zfp740_2/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--VGCCCCTCCGGGG--
AAATTCCCCCCGGAAGT
 A C G T A C G T T G C A C T A G G A T C A T G C A G T C A G T C A C G T A G T C A G T C A T C G C T A G A T C G C T A G A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:VGCCCCTCCGGGG
--CCCCCCCC---
 T G C A C T A G G A T C A T G C A G T C A G T C A C G T A G T C A G T C A T C G C T A G A T C G C T A G
A C G T A C G T A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T