Information for 2-GAGCAGGAGCCGG (Motif 10)

T C A G T G C A T A C G A T G C T C G A A C T G A T C G T C G A C T A G G T A C T G A C A C T G A C T G
Reverse Opposite:
T G A C T G A C A C T G C A T G A G T C A G C T A T G C A G T C A G C T A T C G A G T C A C G T A G T C
p-value:1e-11
log p-value:-2.596e+01
Information Content per bp:1.752
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.33%
Number of Background Sequences with motif144.6
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets48.1 +/- 21.3bp
Average Position of motif in Background52.3 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GAGCAGGAGCCGG
SDGCAGGTGCNS-
 T C A G T G C A T A C G A T G C T C G A A C T G A T C G T C G A C T A G G T A C T G A C A C T G A C T G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T

POL011.1_XCPE1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAGCAGGAGCCGG
GGGCGGGACC---
 T C A G T G C A T A C G A T G C T C G A A C T G A T C G T C G A C T A G G T A C T G A C A C T G A C T G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GAGCAGGAGCCGG
TGCGCAGGCGC---
 A C G T T C A G T G C A T A C G A T G C T C G A A C T G A T C G T C G A C T A G G T A C T G A C A C T G A C T G
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGCAGGAGCCGG
GAGSCCGAGC---
 T C A G T G C A T A C G A T G C T C G A A C T G A T C G T C G A C T A G G T A C T G A C A C T G A C T G
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAGCAGGAGCCGG
GCGCATGCGCAG-
 T C A G T G C A T A C G A T G C T C G A A C T G A T C G T C G A C T A G G T A C T G A C A C T G A C T G
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G A C G T

POL013.1_MED-1/Jaspar

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GAGCAGGAGCCGG
----CGGAGC---
 T C A G T G C A T A C G A T G C T C G A A C T G A T C G T C G A C T A G G T A C T G A C A C T G A C T G
A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GAGCAGGAGCCGG
CACAGCAGGGGG---
 A C G T A C G T T C A G T G C A T A C G A T G C T C G A A C T G A T C G T C G A C T A G G T A C T G A C A C T G A C T G
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GAGCAGGAGCCGG
-NNCAGGTGCG--
 T C A G T G C A T A C G A T G C T C G A A C T G A T C G T C G A C T A G G T A C T G A C A C T G A C T G
A C G T G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GAGCAGGAGCCGG
DCHCAGCAGGRGGCC-
 A C G T A C G T A C G T T C A G T G C A T A C G A T G C T C G A A C T G A T C G T C G A C T A G G T A C T G A C A C T G A C T G
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:GAGCAGGAGCCGG--
AAGGKGRCGCAGGCA
 T C A G T G C A T A C G A T G C T C G A A C T G A T C G T C G A C T A G G T A C T G A C A C T G A C T G A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A