Information for 2-CCCCTCCAGAGAT (Motif 2)

A G T C A G T C A G T C A G T C A C G T G T A C A G T C C G T A C T A G C G T A C A T G G T C A A C G T
Reverse Opposite:
C G T A A C G T G A T C A C G T A G T C A C G T A C T G A C T G C G T A A C T G A C T G A C T G A C T G
p-value:1e-13
log p-value:-3.087e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.5 +/- 25.6bp
Average Position of motif in Background57.6 +/- 17.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---CCCCTCCAGAGAT
TTCCCCCTAC------
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T G T A C A G T C C G T A C T A G C G T A C A T G G T C A A C G T
A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF740/MA0753.1/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCCCTCCAGAGAT
CCCCCCCCAC----
 A C G T A G T C A G T C A G T C A G T C A C G T G T A C A G T C C G T A C T A G C G T A C A T G G T C A A C G T
T G A C G T A C G T A C G A T C G A T C A G T C T G A C G T A C G T C A G A T C A C G T A C G T A C G T A C G T

PB0092.1_Zbtb7b_1/Jaspar

Match Rank:3
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCCCTCCAGAGAT
AAGCCCCCCAAAAAT
 A C G T A C G T A G T C A G T C A G T C A G T C A C G T G T A C A G T C C G T A C T A G C G T A C A T G G T C A A C G T
C T G A C T G A T C A G T A G C T A G C G T A C G T A C A G T C G A T C G C T A G C T A G C T A C G T A G T C A A G C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTCCAGAGAT
NSCACTYVAV----
 A C G T A G T C A G T C A G T C A G T C A C G T G T A C A G T C C G T A C T A G C G T A C A T G G T C A A C G T
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTCCAGAGAT
CCCCCCCC------
 A C G T A G T C A G T C A G T C A G T C A C G T G T A C A G T C C G T A C T A G C G T A C A T G G T C A A C G T
A G T C A G T C A T G C A G T C A G T C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCCCTCCAGAGAT
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T G T A C A G T C C G T A C T A G C G T A C A T G G T C A A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCCCTCCAGAGAT
CCCCCTGCTGTG--
 A C G T A G T C A G T C A G T C A G T C A C G T G T A C A G T C C G T A C T A G C G T A C A T G G T C A A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCCCTCCAGAGAT
GGCCYCCTGCTGDGH-
 A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T G T A C A G T C C G T A C T A G C G T A C A T G G T C A A C G T
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T

PB0107.1_Ascl2_2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CCCCTCCAGAGAT
CTATCCCCGCCCTATT-
 A C G T A C G T A C G T A C G T A G T C A G T C A G T C A G T C A C G T G T A C A G T C C G T A C T A G C G T A C A T G G T C A A C G T
A T G C G A C T T G C A C G A T G T A C T A G C G T A C T G A C C T A G A G T C G A T C G A T C A G C T C T G A A C G T G A C T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCCCTCCAGAGAT
AGCCACTCAAG----
 A C G T A C G T A G T C A G T C A G T C A G T C A C G T G T A C A G T C C G T A C T A G C G T A C A T G G T C A A C G T
C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G A C G T A C G T A C G T A C G T