Information for 8-GCGCAGCGGC (Motif 18)

T C A G G T A C A C T G T A G C G C T A A T C G A G T C A C T G T A C G T G A C
Reverse Opposite:
A C T G A T G C T G A C T C A G T A G C C G A T A T C G T G A C C A T G A G T C
p-value:1e-6
log p-value:-1.562e+01
Information Content per bp:1.654
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.27%
Number of Background Sequences with motif762.7
Percentage of Background Sequences with motif1.58%
Average Position of motif in Targets51.3 +/- 27.1bp
Average Position of motif in Background50.9 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.78
Offset:1
Orientation:forward strand
Alignment:GCGCAGCGGC-
-CGCAGCTGCG
 T C A G G T A C A C T G T A G C G C T A A T C G A G T C A C T G T A C G T G A C A C G T
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

NRF1/MA0506.1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GCGCAGCGGC
TGCGCAGGCGC
 A C G T T C A G G T A C A C T G T A G C G C T A A T C G A G T C A C T G T A C G T G A C
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GCGCAGCGGC----
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T T C A G G T A C A C T G T A G C G C T A A T C G A G T C A C T G T A C G T G A C A C G T A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:GCGCAGCGGC---
-AGCAGCTGCTNN
 T C A G G T A C A C T G T A G C G C T A A T C G A G T C A C T G T A C G T G A C A C G T A C G T A C G T
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GCGCAGCGGC--
--NCAGCTGCTG
 T C A G G T A C A C T G T A G C G C T A A T C G A G T C A C T G T A C G T G A C A C G T A C G T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:GCGCAGCGGC-
-AGCAGCTGCT
 T C A G G T A C A C T G T A G C G C T A A T C G A G T C A C T G T A C G T G A C A C G T
A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.66
Offset:0
Orientation:forward strand
Alignment:GCGCAGCGGC
NNACAGCTGC
 T C A G G T A C A C T G T A G C G C T A A T C G A G T C A C T G T A C G T G A C
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:GCGCAGCGGC-
NNGCAGCTGTC
 T C A G G T A C A C T G T A G C G C T A A T C G A G T C A C T G T A C G T G A C A C G T
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:9
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GCGCAGCGGC-
NNVVCAGCTGBN
 A C G T T C A G G T A C A C T G T A G C G C T A A T C G A G T C A C T G T A C G T G A C A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:10
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GCGCAGCGGC-
---CAGCTGNT
 T C A G G T A C A C T G T A G C G C T A A T C G A G T C A C T G T A C G T G A C A C G T
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T