Information for 6-TCCCTTTCCTTGC (Motif 12)

A C G T A G T C A G T C A G T C A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C T G A T G C
Reverse Opposite:
A T C G G T A C C G T A C G T A A C T G A C T G C G T A C G T A C G T A A C T G A C T G A C T G G T C A
p-value:1e-9
log p-value:-2.128e+01
Information Content per bp:1.913
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif5.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.3 +/- 23.3bp
Average Position of motif in Background38.3 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer

Match Rank:1
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TCCCTTTCCTTGC-
--ACTTTCGTTTCT
 A C G T A G T C A G T C A G T C A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C T G A T G C A C G T
A C G T A C G T T G C A A T G C A C G T A C G T A C G T A T G C C T A G A C G T A C G T A G C T G A T C A G C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TCCCTTTCCTTGC
--BNTGDCCTTG-
 A C G T A G T C A G T C A G T C A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C T G A T G C
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TCCCTTTCCTTGC--
TCACTTTCACTTTCN
 A C G T A G T C A G T C A G T C A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C T G A T G C A C G T A C G T
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T

IRF2/MA0051.1/Jaspar

Match Rank:4
Score:0.58
Offset:-9
Orientation:reverse strand
Alignment:---------TCCCTTTCCTTGC
GTTTTGCTTTCACTTTCC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C T G A T G C
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:5
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------TCCCTTTCCTTGC
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C T G A T G C
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCCCTTTCCTTGC
NNACTTGCCTT--
 A C G T A G T C A G T C A G T C A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C T G A T G C
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TCCCTTTCCTTGC
-NNAYTTCCTGHN
 A C G T A G T C A G T C A G T C A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C T G A T G C
A C G T A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:8
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCCCTTTCCTTGC
ACTTTCACTTTC-----
 A C G T A C G T A C G T A C G T A C G T A G T C A G T C A G T C A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C T G A T G C
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:9
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:TCCCTTTCCTTGC--
-NNNTTTCCTGGAAA
 A C G T A G T C A G T C A G T C A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C T G A T G C A C G T A C G T
A C G T A G T C A T G C T C G A A G C T A C G T A C G T A G T C G A T C G A C T C T A G A C T G G T C A C G T A T C G A

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TCCCTTTCCTTGC-
--ACTTTCACTTTC
 A C G T A G T C A G T C A G T C A C G T A C G T A C G T A G T C G T A C A C G T A C G T A C T G A T G C A C G T
A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C