Information for 9-TCTCTTAAGAGAA (Motif 17)

A C G T A G T C A C G T A G T C A C G T C G A T C G T A C G T A A C T G C G T A A C T G C G T A C T G A
Reverse Opposite:
A G C T A C G T A G T C A C G T A G T C A C G T C G A T C G T A C G T A A C T G C G T A A C T G C G T A
p-value:1e-3
log p-value:-8.767e+00
Information Content per bp:1.924
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.23%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets21.0 +/- 0.7bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEF2A/MA0052.3/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCTCTTAAGAGAA
TCTAAAAATAGA-
 A C G T A G T C A C G T A G T C A C G T C G A T C G T A C G T A A C T G C G T A A C T G C G T A C T G A
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T

MEF2D/MA0773.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TCTCTTAAGAGAA
TCTATTTATAGN-
 A C G T A G T C A C G T A G T C A C G T C G A T C G T A C G T A A C T G C G T A A C T G C G T A C T G A
C A G T A G T C A G C T C G T A C G A T G C A T C G A T G C T A C A G T C T G A C T A G G A C T A C G T

GFX(?)/Promoter/Homer

Match Rank:3
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TCTCTTAAGAGAA-
--TCTCGCGAGAAT
 A C G T A G T C A C G T A G T C A C G T C G A T C G T A C G T A A C T G C G T A A C T G C G T A C T G A A C G T
A C G T A C G T G A C T T G A C A C G T T A G C C A T G A G T C C A T G T C G A A C T G T C G A C T G A A G C T

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:forward strand
Alignment:TCTCTTAAGAGAA
GCTCGTAAAAA--
 A C G T A G T C A C G T A G T C A C G T C G A T C G T A C G T A A C T G C G T A A C T G C G T A C T G A
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TCTCTTAAGAGAA
RSCACTYRAG----
 A C G T A C G T A G T C A C G T A G T C A C G T C G A T C G T A C G T A A C T G C G T A A C T G C G T A C T G A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCTCTTAAGAGAA
NSCACTYVAV----
 A C G T A C G T A G T C A C G T A G T C A C G T C G A T C G T A C G T A A C T G C G T A A C T G C G T A C T G A
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T A C G T

MEF2B/MA0660.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:TCTCTTAAGAGAA
GCTATTTATAGC-
 A C G T A G T C A C G T A G T C A C G T C G A T C G T A C G T A A C T G C G T A A C T G C G T A C T G A
C A T G A G T C C A G T C G T A C G A T C G A T G C A T C G T A C G A T C T G A C A T G G A T C A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:TCTCTTAAGAGAA---
----GAAAGTGAAAGT
 A C G T A G T C A C G T A G T C A C G T C G A T C G T A C G T A A C T G C G T A A C T G C G T A C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T

PH0068.1_Hoxc13/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---TCTCTTAAGAGAA
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T C G A T C G T A C G T A A C T G C G T A A C T G C G T A C T G A
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

GATA3/MA0037.2/Jaspar

Match Rank:10
Score:0.49
Offset:7
Orientation:forward strand
Alignment:TCTCTTAAGAGAA--
-------AGATAAGA
 A C G T A G T C A C G T A G T C A C G T C G A T C G T A C G T A A C T G C G T A A C T G C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C G T C G T A C G T A C T A G T C G A