Information for 3-CAGCTGAAAARCR (Motif 5)

A T G C C G T A A C T G A T G C A C G T A C T G C G T A C T G A C G T A T G C A C T G A A T G C C T G A
Reverse Opposite:
A G C T A T C G A G C T A C G T A C G T A G C T C G A T A G T C C G T A A T C G A G T C A C G T A T C G
p-value:1e-11
log p-value:-2.664e+01
Information Content per bp:1.789
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif35.5
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets35.1 +/- 23.0bp
Average Position of motif in Background45.5 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.73
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGAAAARCR
NAHCAGCTGD------
 A C G T A C G T A C G T A T G C C G T A A C T G A T G C A C G T A C T G C G T A C T G A C G T A T G C A C T G A A T G C C T G A
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGAAAARCR
AACAGCTG-------
 A C G T A C G T A T G C C G T A A C T G A T G C A C G T A C T G C G T A C T G A C G T A T G C A C T G A A T G C C T G A
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:CAGCTGAAAARCR
-AGGTGTTAAT--
 A T G C C G T A A C T G A T G C A C G T A C T G C G T A C T G A C G T A T G C A C T G A A T G C C T G A
A C G T C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.69
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGAAAARCR
NAACAGCTGT------
 A C G T A C G T A C G T A T G C C G T A A C T G A T G C A C G T A C T G C G T A C T G A C G T A T G C A C T G A A T G C C T G A
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CAGCTGAAAARCR
-AGGTGTGAAM--
 A T G C C G T A A C T G A T G C A C G T A C T G C G T A C T G A C G T A T G C A C T G A A T G C C T G A
A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGAAAARCR
GCAGCTGTNN----
 A C G T A T G C C G T A A C T G A T G C A C G T A C T G C G T A C T G A C G T A T G C A C T G A A T G C C T G A
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.69
Offset:-5
Orientation:reverse strand
Alignment:-----CAGCTGAAAARCR
NGNGACAGCTGCN-----
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A A C T G A T G C A C G T A C T G C G T A C T G A C G T A T G C A C T G A A T G C C T G A
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGAAAARCR
GACAGCTGCAG----
 A C G T A C G T A T G C C G T A A C T G A T G C A C G T A C T G C G T A C T G A C G T A T G C A C T G A A T G C C T G A
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGAAAARCR
AACAGCTGCAG----
 A C G T A C G T A T G C C G T A A C T G A T G C A C G T A C T G C G T A C T G A C G T A T G C A C T G A A T G C C T G A
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T A C G T A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:10
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGAAAARCR
BAACAGCTGT------
 A C G T A C G T A C G T A T G C C G T A A C T G A T G C A C G T A C T G C G T A C T G A C G T A T G C A C T G A A T G C C T G A
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T