Information for 7-CWAMCATTTT (Motif 17)

G T A C C G T A C G T A G T A C T A G C C T G A A C G T A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C G T A A G C T A T C G A C T G A C G T C G A T A C T G
p-value:1e-7
log p-value:-1.708e+01
Information Content per bp:1.845
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.67%
Number of Background Sequences with motif119.8
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets45.0 +/- 26.9bp
Average Position of motif in Background51.0 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1/MA0095.2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-CWAMCATTTT-
GCNGCCATCTTG
 A C G T G T A C C G T A C G T A G T A C T A G C C T G A A C G T A C G T A C G T A C G T A C G T
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CWAMCATTTT---
TNCNNAACAATTTTTNC
 A C G T A C G T A C G T A C G T G T A C C G T A C G T A G T A C T A G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

PB0165.1_Sox11_2/Jaspar

Match Rank:3
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CWAMCATTTT
NNCNNAACAATTNT
 A C G T A C G T A C G T A C G T G T A C C G T A C G T A G T A C T A G C C T G A A C G T A C G T A C G T A C G T
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CWAMCATTTT---
---CCATTGTTYB
 G T A C C G T A C G T A G T A C T A G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

MEF2C/MA0497.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CWAMCATTTT------
-TTCTATTTTTAGNNN
 G T A C C G T A C G T A G T A C T A G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CWAMCATTTT--
--NCCATTGTTY
 G T A C C G T A C G T A G T A C T A G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G A G T C G A T C G C T A C G A T A C G T A T C G A C G T A G C T G A C T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CWAMCATTTT---
---CTATTTTTGG
 G T A C C G T A C G T A G T A C T A G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:CWAMCATTTT-
---CCWTTGTY
 G T A C C G T A C G T A G T A C T A G C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T

PH0075.1_Hoxd10/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CWAMCATTTT--------
-NTNAATTTTATTGNATT
 G T A C C G T A C G T A G T A C T A G C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T G C T A G C T A C T G A A G C T C G A T C G A T C G A T C T G A G C A T C A G T C T A G A G T C T G C A G A C T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CWAMCATTTT-
--CTCATTGTC
 G T A C C G T A C G T A G T A C T A G C C T G A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C