Information for 1-GGMACTKGAGAGRKCA (Motif 1)

A C T G A C T G G T C A C G T A A G T C C G A T A C T G A T C G C T G A A C T G C G T A A T C G C T G A A C G T A G T C C G T A
Reverse Opposite:
A C G T A C T G G T A C A G C T A T G C A C G T A G T C G A C T A T G C G T A C C G T A A C T G A C G T A C G T A G T C A G T C
p-value:1e-13
log p-value:-3.096e+01
Information Content per bp:1.880
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.5 +/- 19.6bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGMACTKGAGAGRKCA
GGNTCTCGCGAGAAC-
 A C T G A C T G G T C A C G T A A G T C C G A T A C T G A T C G C T G A A C T G C G T A A T C G C T G A A C G T A G T C C G T A
T A C G T C A G T G C A A G C T T G A C A G C T A G T C A C T G G A T C A C T G T C G A A C T G C T G A C T G A A T G C A C G T

PH0111.1_Nkx2-2/Jaspar

Match Rank:2
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGMACTKGAGAGRKCA
ATAACCACTTGAAAATT--
 A C G T A C G T A C G T A C T G A C T G G T C A C G T A A G T C C G A T A C T G A T C G C T G A A C T G C G T A A T C G C T G A A C G T A G T C C G T A
G C A T C G A T T C G A C T G A T A G C A G T C G C T A G T A C C G A T A G C T T C A G C G T A T C G A C G T A C G T A A C G T C G A T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.56
Offset:8
Orientation:forward strand
Alignment:GGMACTKGAGAGRKCA
--------AGRGGTCA
 A C T G A C T G G T C A C G T A A G T C C G A T A C T G A T C G C T G A A C T G C G T A A T C G C T G A A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:4
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GGMACTKGAGAGRKCA
----CTTGAGTGGCT-
 A C T G A C T G G T C A C G T A A G T C C G A T A C T G A T C G C T G A A C T G C G T A A T C G C T G A A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:5
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGMACTKGAGAGRKCA-----
----GGCGAGGGGTCAAGGGC
 A C T G A C T G G T C A C G T A A G T C C G A T A C T G A T C G C T G A A C T G C G T A A T C G C T G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GGMACTKGAGAGRKCA
GWAAYHTGAKMC----
 A C T G A C T G G T C A C G T A A G T C C G A T A C T G A T C G C T G A A C T G C G T A A T C G C T G A A C G T A G T C C G T A
C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGMACTKGAGAGRKCA
-CCACTTGAA------
 A C T G A C T G G T C A C G T A A G T C C G A T A C T G A T C G C T G A A C T G C G T A A T C G C T G A A C G T A G T C C G T A
A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.54
Offset:8
Orientation:forward strand
Alignment:GGMACTKGAGAGRKCA
--------TRAGGTCA
 A C T G A C T G G T C A C G T A A G T C C G A T A C T G A T C G C T G A A C T G C G T A A T C G C T G A A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGMACTKGAGAGRKCA
----BTBRAGTGSN--
 A C T G A C T G G T C A C G T A A G T C C G A T A C T G A T C G C T G A A C T G C G T A A T C G C T G A A C G T A G T C C G T A
A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GGMACTKGAGAGRKCA
RSCACTYRAG------
 A C T G A C T G G T C A C G T A A G T C C G A T A C T G A T C G C T G A A C T G C G T A A T C G C T G A A C G T A G T C C G T A
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T A C G T A C G T A C G T