Information for 2-CCCTTTTTGG (Motif 5)

G T A C G T A C A G T C A G C T A C G T A G C T C A G T A C G T C A T G A C T G
Reverse Opposite:
A G T C G T A C T G C A G T C A C T G A G T C A C T G A C T A G C A T G A C T G
p-value:1e-12
log p-value:-2.816e+01
Information Content per bp:1.738
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif4.57%
Number of Background Sequences with motif458.2
Percentage of Background Sequences with motif0.94%
Average Position of motif in Targets44.2 +/- 28.0bp
Average Position of motif in Background50.6 +/- 25.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0008.1_MADS_class/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:CCCTTTTTGG
CCATATATGG
 G T A C G T A C A G T C A G C T A C G T A G C T C A G T A C G T C A T G A C T G
G A T C A G T C G C T A C G A T C G T A C G A T C G T A G C A T C T A G C A T G

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCCTTTTTGG
TNCCATATATGG
 A C G T A C G T G T A C G T A C A G T C A G C T A C G T A G C T C A G T A C G T C A T G A C T G
C A G T A C T G G A T C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G A T C G

Sox2/MA0143.3/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCCTTTTTGG
-CCTTTGTT-
 G T A C G T A C A G T C A G C T A C G T A G C T C A G T A C G T C A T G A C T G
A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T

PB0078.1_Srf_1/Jaspar

Match Rank:4
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCCTTTTTGG--
TTCCATATATGGAA
 A C G T A C G T G T A C G T A C A G T C A G C T A C G T A G C T C A G T A C G T C A T G A C T G A C G T A C G T
G C A T C G A T G T A C A G T C C G T A C G A T C G T A G C A T C G T A G C A T C T A G C A T G G C A T G T C A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CCCTTTTTGG
-CCWTTGTY-
 G T A C G T A C A G T C A G C T A C G T A G C T C A G T A C G T C A T G A C T G
A C G T A T G C G A T C C G A T A C G T A C G T A C T G C A G T A G C T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CCCTTTTTGG---
--TTTTATGGCTN
 G T A C G T A C A G T C A G C T A C G T A G C T C A G T A C G T C A T G A C T G A C G T A C G T A C G T
A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T

SOX10/MA0442.1/Jaspar

Match Rank:7
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCCTTTTTGG
--CTTTGT--
 G T A C G T A C A G T C A G C T A C G T A G C T C A G T A C G T C A T G A C T G
A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T

SRF/MA0083.3/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---CCCTTTTTGG---
TGNCCATATATGGTCA
 A C G T A C G T A C G T G T A C G T A C A G T C A G C T A C G T A G C T C A G T A C G T C A T G A C T G A C G T A C G T A C G T
G C A T A C T G G T C A G A T C A T G C C G T A C G A T T G C A A G C T G C T A G C A T T C A G A T C G C A G T T G A C C G T A

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CCCTTTTTGG
AGGVNCCTTTGT--
 A C G T A C G T A C G T A C G T G T A C G T A C A G T C A G C T A C G T A G C T C A G T A C G T C A T G A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCCTTTTTGG-
GCTATTTTTGGM
 A C G T G T A C G T A C A G T C A G C T A C G T A G C T C A G T A C G T C A T G A C T G A C G T
C A T G A G T C G A C T C G T A C G A T G C A T G A C T G C A T C G A T C T A G C A T G T G A C