Information for 19-ATAGGTTAAAACC (Motif 36)

C G T A C A G T C G T A C T A G C T A G C G A T C G A T C G T A C G T A G T C A G T C A G A T C G T A C
Reverse Opposite:
C A T G C T A G A C G T A C G T G A C T C G A T G C T A G C T A G A T C A G T C G A C T G C T A C G A T
p-value:1e-7
log p-value:-1.700e+01
Information Content per bp:1.664
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif63.6
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets48.6 +/- 30.9bp
Average Position of motif in Background49.7 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0123.1_Foxl1_2/Jaspar

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATAGGTTAAAACC-----
--ATATCAAAACAAAACA
 C G T A C A G T C G T A C T A G C T A G C G A T C G A T C G T A C G T A G T C A G T C A G A T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:ATAGGTTAAAACC
----ATTAAA---
 C G T A C A G T C G T A C T A G C T A G C G A T C G A T C G T A C G T A G T C A G T C A G A T C G T A C
A C G T A C G T A C G T A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATAGGTTAAAACC--
TATCATTAGAACGCT
 C G T A C A G T C G T A C T A G C T A G C G A T C G A T C G T A C G T A G T C A G T C A G A T C G T A C A C G T A C G T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:forward strand
Alignment:ATAGGTTAAAACC
-CGGTTTCAAA--
 C G T A C A G T C G T A C T A G C T A G C G A T C G A T C G T A C G T A G T C A G T C A G A T C G T A C
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:ATAGGTTAAAACC
---NATTCAAAT-
 C G T A C A G T C G T A C T A G C T A G C G A T C G A T C G T A C G T A G T C A G T C A G A T C G T A C
A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

PH0075.1_Hoxd10/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATAGGTTAAAACC---
AATGCAATAAAATTTAT
 A C G T C G T A C A G T C G T A C T A G C T A G C G A T C G A T C G T A C G T A G T C A G T C A G A T C G T A C A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

PB0109.1_Bbx_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-ATAGGTTAAAACC---
TGATTGTTAACAGTTGG
 A C G T C G T A C A G T C G T A C T A G C T A G C G A T C G A T C G T A C G T A G T C A G T C A G A T C G T A C A C G T A C G T A C G T
G A C T T C A G G C T A G A C T A C G T C A T G C A G T A G C T T C G A G T C A G T A C T C G A A T C G G C A T A C G T C T A G T C A G

FOXC1/MA0032.2/Jaspar

Match Rank:8
Score:0.56
Offset:1
Orientation:forward strand
Alignment:ATAGGTTAAAACC
-TATGTAAATAT-
 C G T A C A G T C G T A C T A G C T A G C G A T C G A T C G T A C G T A G T C A G T C A G A T C G T A C
A C G T G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T A C G T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:9
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ATAGGTTAAAACC
-AAAGTAAACA--
 C G T A C A G T C G T A C T A G C T A G C G A T C G A T C G T A C G T A G T C A G T C A G A T C G T A C
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:ATAGGTTAAAACC
-AAAGTAAACA--
 C G T A C A G T C G T A C T A G C T A G C G A T C G A T C G T A C G T A G T C A G T C A G A T C G T A C
A C G T G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T A C G T