Information for 9-AGCTAATGAT (Motif 42)

T G C A A C T G T A G C A C G T G T C A C T G A A G C T A T C G G T C A A G C T
Reverse Opposite:
T C G A C A G T A T G C C T G A G A C T C A G T T G C A A T C G T G A C A C G T
p-value:1e-6
log p-value:-1.442e+01
Information Content per bp:1.687
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets62.7 +/- 40.9bp
Average Position of motif in Background32.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EVX2/MA0888.1/Jaspar

Match Rank:1
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AGCTAATGAT-
-NNTAATTANN
 T G C A A C T G T A G C A C G T G T C A C T G A A G C T A T C G G T C A A G C T A C G T
A C G T T A C G A T G C G A C T T C G A T G C A A G C T A C G T C T G A A T G C A T G C

EVX1/MA0887.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:reverse strand
Alignment:AGCTAATGAT-
-GNTAATTANN
 T G C A A C T G T A G C A C G T G T C A C T G A A G C T A T C G G T C A A G C T A C G T
A C G T A T C G T A G C G A C T C T G A T G C A A G C T A G C T C T G A A T G C A G T C

HOXA2/MA0900.1/Jaspar

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:AGCTAATGAT-
-GNTAATTANN
 T G C A A C T G T A G C A C G T G T C A C T G A A G C T A T C G G T C A A G C T A C G T
A C G T A T C G A T C G C G A T C T G A G T C A A G C T A C G T C T G A A T C G A T C G

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:4
Score:0.71
Offset:1
Orientation:forward strand
Alignment:AGCTAATGAT
-GKTAATGR-
 T G C A A C T G T A G C A C G T G T C A C T G A A G C T A T C G G T C A A G C T
A C G T A C T G C A G T A C G T C G T A C G T A A C G T A C T G C T G A A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGCTAATGAT-
-NNTAATTANN
 T G C A A C T G T A G C A C G T G T C A C T G A A G C T A T C G G T C A A G C T A C G T
A C G T A C T G A G T C C G A T C T G A C T G A A G C T A C G T C T G A A T C G G A C T

HOXB2/MA0902.1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:AGCTAATGAT-
-NNTAATTANN
 T G C A A C T G T A G C A C G T G T C A C T G A A G C T A T C G G T C A A G C T A C G T
A C G T A C T G A G C T C G A T C T G A C G T A A G C T A C G T C T G A A T G C A G C T

POU6F2/MA0793.1/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AGCTAATGAT
AGCTCATTAT
 T G C A A C T G T A G C A C G T G T C A C T G A A G C T A T C G G T C A A G C T
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

PDX1/MA0132.2/Jaspar

Match Rank:8
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:AGCTAATGAT
--CTAATTAN
 T G C A A C T G T A G C A C G T G T C A C T G A A G C T A T C G G T C A A G C T
A C G T A C G T A G T C A C G T C G T A C G T A A C G T A C G T C T G A A T G C

EMX1/MA0612.1/Jaspar

Match Rank:9
Score:0.68
Offset:1
Orientation:forward strand
Alignment:AGCTAATGAT-
-CCTAATTACC
 T G C A A C T G T A G C A C G T G T C A C T G A A G C T A T C G G T C A A G C T A C G T
A C G T T G A C A G T C G A C T T C G A C G T A C G A T C A G T C T G A T A G C A G T C

VAX1/MA0722.1/Jaspar

Match Rank:10
Score:0.68
Offset:2
Orientation:forward strand
Alignment:AGCTAATGAT
--CTAATTAC
 T G C A A C T G T A G C A C G T G T C A C T G A A G C T A T C G G T C A A G C T
A C G T A C G T A G T C G A C T G T C A G T C A C G A T C A G T C T G A G A T C