Information for 16-CGCACAGAGGCCVGTC (Motif 21)

A G T C T C A G G T A C T C G A A T G C C T G A A T C G G T C A C T A G T A C G A T G C G T A C T C G A A T C G A G C T T A G C
Reverse Opposite:
A T C G T C G A A T G C A C G T A C T G T A C G A G T C A G T C A C G T A T G C A G C T A T C G A C G T A C T G A G T C C T A G
p-value:1e-10
log p-value:-2.388e+01
Information Content per bp:1.697
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.19%
Number of Background Sequences with motif114.8
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets37.9 +/- 19.5bp
Average Position of motif in Background49.4 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---CGCACAGAGGCCVGTC
AGCGGCACACACGCAA---
 A C G T A C G T A C G T A G T C T C A G G T A C T C G A A T G C C T G A A T C G G T C A C T A G T A C G A T G C G T A C T C G A A T C G A G C T T A G C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CGCACAGAGGCCVGTC
----CAAAGGTCAG--
 A G T C T C A G G T A C T C G A A T G C C T G A A T C G G T C A C T A G T A C G A T G C G T A C T C G A A T C G A G C T T A G C
A C G T A C G T A C G T A C G T A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CGCACAGAGGCCVGTC
--CACAGCGGGGGGTC
 A G T C T C A G G T A C T C G A A T G C C T G A A T C G G T C A C T A G T A C G A T G C G T A C T C G A A T C G A G C T T A G C
A C G T A C G T T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C

ZIC3/MA0697.1/Jaspar

Match Rank:4
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:CGCACAGAGGCCVGTC
-NCGCAGCGGGGGGTC
 A G T C T C A G G T A C T C G A A T G C C T G A A T C G G T C A C T A G T A C G A T G C G T A C T C G A A T C G A G C T T A G C
A C G T C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.51
Offset:6
Orientation:forward strand
Alignment:CGCACAGAGGCCVGTC-
------AAGGCAAGTGT
 A G T C T C A G G T A C T C G A A T G C C T G A A T C G G T C A C T A G T A C G A T G C G T A C T C G A A T C G A G C T T A G C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:6
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CGCACAGAGGCCVGTC
-SCAGYCADGCATGAC
 A G T C T C A G G T A C T C G A A T G C C T G A A T C G G T C A C T A G T A C G A T G C G T A C T C G A A T C G A G C T T A G C
A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PB0199.1_Zfp161_2/Jaspar

Match Rank:7
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CGCACAGAGGCCVGTC
GCCGCGCAGTGCGT----
 A C G T A C G T A G T C T C A G G T A C T C G A A T G C C T G A A T C G G T C A C T A G T A C G A T G C G T A C T C G A A T C G A G C T T A G C
C A T G G A T C A G T C T A C G G A T C C T A G T G A C G T C A C T A G A C G T C T A G G T A C T C A G A G C T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CGCACAGAGGCCVGTC
-NCNCAGCGGGGGGTC
 A G T C T C A G G T A C T C G A A T G C C T G A A T C G G T C A C T A G T A C G A T G C G T A C T C G A A T C G A G C T T A G C
A C G T C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:CGCACAGAGGCCVGTC
---ACAAAGGNBCCT-
 A G T C T C A G G T A C T C G A A T G C C T G A A T C G G T C A C T A G T A C G A T G C G T A C T C G A A T C G A G C T T A G C
A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CGCACAGAGGCCVGTC----
------CAGGCCNNGGCCNN
 A G T C T C A G G T A C T C G A A T G C C T G A A T C G G T C A C T A G T A C G A T G C G T A C T C G A A T C G A G C T T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C