Information for 8-GAGCGTGCAC (Motif 17)

T C A G T G C A A T C G G T A C T C A G A G C T A C T G A T G C C G T A A T G C
Reverse Opposite:
A T C G C G A T A T C G A G T C C T G A A G T C A C T G A T G C A C G T A G T C
p-value:1e-7
log p-value:-1.748e+01
Information Content per bp:1.833
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif227.7
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets43.7 +/- 20.6bp
Average Position of motif in Background49.6 +/- 36.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:1
Score:0.68
Offset:1
Orientation:forward strand
Alignment:GAGCGTGCAC
-TGCGTG---
 T C A G T G C A A T C G G T A C T C A G A G C T A C T G A T G C C G T A A T G C
A C G T G A C T A C T G A G T C A C T G A C G T A C T G A C G T A C G T A C G T

PB0095.1_Zfp161_1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--GAGCGTGCAC----
TGGCGCGCGCGCCTGA
 A C G T A C G T T C A G T G C A A T C G G T A C T C A G A G C T A C T G A T G C C G T A A T G C A C G T A C G T A C G T A C G T
C A G T C T A G C T A G A T G C T C A G G A T C C T A G A G T C C T A G A G T C C T A G G A T C G A T C G A C T C T A G C G T A

NRF1/MA0506.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAGCGTGCAC-
GCGCCTGCGCA
 T C A G T G C A A T C G G T A C T C A G A G C T A C T G A T G C C G T A A T G C A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

PB0104.1_Zscan4_1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GAGCGTGCAC-----
NTNTATGTGCACATNNN
 A C G T A C G T T C A G T G C A A T C G G T A C T C A G A G C T A C T G A T G C C G T A A T G C A C G T A C G T A C G T A C G T A C G T
C A G T G C A T C G A T C G A T C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A G A C T A C T G C A G T G T C A

Hes1/MA1099.1/Jaspar

Match Rank:5
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GAGCGTGCAC
NNCGCGTGNN-
 A C G T T C A G T G C A A T C G G T A C T C A G A G C T A C T G A T G C C G T A A T G C
C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GAGCGTGCAC-----
NNGTATGTGCACATNNN
 A C G T A C G T T C A G T G C A A T C G G T A C T C A G A G C T A C T G A T G C C G T A A T G C A C G T A C G T A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:GAGCGTGCAC
GGACGTGC--
 T C A G T G C A A T C G G T A C T C A G A G C T A C T G A T G C C G T A A T G C
T A C G A C T G T C G A A G T C A C T G A C G T A C T G T A G C A C G T A C G T

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GAGCGTGCAC
RTACGTGC--
 T C A G T G C A A T C G G T A C T C A G A G C T A C T G A T G C C G T A A T G C
C T G A C A G T C T G A A G T C C T A G G A C T A T C G G T A C A C G T A C G T

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAGCGTGCAC
TTGCGTGCVA
 T C A G T G C A A T C G G T A C T C A G A G C T A C T G A T G C C G T A A T G C
A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GAGCGTGCAC--
GCGCATGCGCAG
 T C A G T G C A A T C G G T A C T C A G A G C T A C T G A T G C C G T A A T G C A C G T A C G T
T C A G T G A C C T A G T A G C T G C A A C G T T A C G A G T C A C T G A G T C T C G A T A C G