Information for 19-TTTGACCCTTDGT (Motif 40)

A C G T A C G T A C G T A C T G C G T A G T A C A G T C A G T C A G C T A G C T C A G T A T C G A C G T
Reverse Opposite:
C G T A A T G C G C T A C T G A C T G A A C T G A C T G A C T G A C G T A G T C C G T A G T C A C G T A
p-value:1e-6
log p-value:-1.558e+01
Information Content per bp:1.847
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.53%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets49.0 +/- 38.5bp
Average Position of motif in Background39.7 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TTTGACCCTTDGT-
NNANTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T A C A G T C A G T C A G C T A G C T C A G T A T C G A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

PB0118.1_Esrra_2/Jaspar

Match Rank:2
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTTGACCCTTDGT-
NNNNTTGACCCCTNNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T A C A G T C A G T C A G C T A G C T C A G T A T C G A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:3
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TTTGACCCTTDGT
--TGACCYCT---
 A C G T A C G T A C G T A C T G C G T A G T A C A G T C A G T C A G C T A G C T C A G T A T C G A C G T
A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TTTGACCCTTDGT-
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T A C A G T C A G T C A G C T A G C T C A G T A T C G A C G T A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TTTGACCCTTDGT
CNNTTGACCTTTG--
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T A C A G T C A G T C A G C T A G C T C A G T A T C G A C G T
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:6
Score:0.67
Offset:-7
Orientation:reverse strand
Alignment:-------TTTGACCCTTDGT
ATTGGACTTTGACCCC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T A C A G T C A G T C A G C T A G C T C A G T A T C G A C G T
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:7
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTGACCCTTDGT-
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T A C A G T C A G T C A G C T A G C T C A G T A T C G A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

RXRB/MA0855.1/Jaspar

Match Rank:8
Score:0.66
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGACCCTTDGT
TGACCTTTGACCCC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T A C A G T C A G T C A G C T A G C T C A G T A T C G A C G T
A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G A T C A G T C A G T C A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:9
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TTTGACCCTTDGT
--TGACCT-----
 A C G T A C G T A C G T A C T G C G T A G T A C A G T C A G T C A G C T A G C T C A G T A T C G A C G T
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

RXRG/MA0856.1/Jaspar

Match Rank:10
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TTTGACCCTTDGT
TGACCTTTGACCCC----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A G T A C A G T C A G T C A G C T A G C T C A G T A T C G A C G T
A G C T T C A G T G C A G T A C G T A C G A C T G A C T G A C T T C A G T G C A G T A C G T A C A G T C A G T C A C G T A C G T A C G T A C G T