Information for 3-GGCARGSAGSTKWWWK (Motif 4)

A C T G A C T G G T A C G T C A C T G A A C T G T A G C C G T A A C T G A T C G A C G T A C T G C G T A C G A T C G A T A C G T
Reverse Opposite:
G T C A G C T A C G T A C G A T G T A C G T C A A T G C A G T C A C G T A T C G A G T C A G C T A C G T A C T G A G T C A G T C
p-value:1e-13
log p-value:-3.022e+01
Information Content per bp:1.793
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.4 +/- 17.8bp
Average Position of motif in Background35.7 +/- 1.9bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GGCARGSAGSTKWWWK
AAGGCAAGTGT-------
 A C G T A C G T A C T G A C T G G T A C G T C A C T G A A C T G T A G C C G T A A C T G A T C G A C G T A C T G C G T A C G A T C G A T A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GGCARGSAGSTKWWWK
----AGCAGCTGCT--
 A C T G A C T G G T A C G T C A C T G A A C T G T A G C C G T A A C T G A T C G A C G T A C T G C G T A C G A T C G A T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:3
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGCARGSAGSTKWWWK
----AACAGGTGT---
 A C T G A C T G G T A C G T C A C T G A A C T G T A G C C G T A A C T G A T C G A C G T A C T G C G T A C G A T C G A T A C G T
A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:4
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GGCARGSAGSTKWWWK
----NNCAGGTGTN--
 A C T G A C T G G T A C G T C A C T G A A C T G T A G C C G T A A C T G A T C G A C G T A C T G C G T A C G A T C G A T A C G T
A C G T A C G T A C G T A C G T G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GGCARGSAGSTKWWWK
-----GCAGCTGTNN-
 A C T G A C T G G T A C G T C A C T G A A C T G T A G C C G T A A C T G A T C G A C G T A C T G C G T A C G A T C G A T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----GGCARGSAGSTKWWWK
TNNGGGCAG-----------
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C G T C A C T G A A C T G T A G C C G T A A C T G A T C G A C G T A C T G C G T A C G A T C G A T A C G T
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ID4/MA0824.1/Jaspar

Match Rank:7
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GGCARGSAGSTKWWWK
----GACAGGTGTN--
 A C T G A C T G G T A C G T C A C T G A A C T G T A G C C G T A A C T G A T C G A C G T A C T G C G T A C G A T C G A T A C G T
A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A A C G T A C G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GGCARGSAGSTKWWWK
----NNCAGGTGNN--
 A C T G A C T G G T A C G T C A C T G A A C T G T A G C C G T A A C T G A T C G A C G T A C T G C G T A C G A T C G A T A C G T
A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GGCARGSAGSTKWWWK
-NGNGACAGCTGCN--
 A C T G A C T G G T A C G T C A C T G A A C T G T A G C C G T A A C T G A T C G A C G T A C T G C G T A C G A T C G A T A C G T
A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T

PB0154.1_Osr1_2/Jaspar

Match Rank:10
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GGCARGSAGSTKWWWK
NNNTTAGGTAGCNTNT--
 A C G T A C G T A C T G A C T G G T A C G T C A C T G A A C T G T A G C C G T A A C T G A T C G A C G T A C T G C G T A C G A T C G A T A C G T
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T A C G T A C G T