Information for 20-KGCTYCCCTWSCNYCC (Motif 37)

A C G T T A C G A T G C A C G T A G T C A G T C A G T C G A T C G C A T C G A T A T C G T G A C G T A C G A C T G T A C A T G C
Reverse Opposite:
T A C G A C T G C T G A C A T G A C T G T A G C G C T A C G T A C T A G C T A G A C T G T C A G T G C A T A C G A T G C T G C A
p-value:1e-7
log p-value:-1.687e+01
Information Content per bp:1.589
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.77%
Number of Background Sequences with motif322.4
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets43.2 +/- 24.7bp
Average Position of motif in Background52.1 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MZF1/MA0056.1/Jaspar

Match Rank:1
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:KGCTYCCCTWSCNYCC
---TCCCCA-------
 A C G T T A C G A T G C A C G T A G T C A G T C A G T C G A T C G C A T C G A T A T C G T G A C G T A C G A C T G T A C A T G C
A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:2
Score:0.59
Offset:1
Orientation:forward strand
Alignment:KGCTYCCCTWSCNYCC
-GTTGCCATGGCAAC-
 A C G T T A C G A T G C A C G T A G T C A G T C A G T C G A T C G C A T C G A T A T C G T G A C G T A C G A C T G T A C A T G C
A C G T C T A G A C G T G A C T A C T G A G T C A G T C G C T A G C A T C T A G C T A G G T A C C T G A C T G A A G T C A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:3
Score:0.57
Offset:3
Orientation:forward strand
Alignment:KGCTYCCCTWSCNYCC--
---TCCCCCCCCCCCCCC
 A C G T T A C G A T G C A C G T A G T C A G T C A G T C G A T C G C A T C G A T A T C G T G A C G T A C G A C T G T A C A T G C A C G T A C G T
A C G T A C G T A C G T C A G T A G T C G T A C G T A C T A G C G T A C G A T C G A T C G T A C G A T C G T A C G T A C G T A C G A T C T G A C

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:KGCTYCCCTWSCNYCC-
-GTTGCCATGGCAACCG
 A C G T T A C G A T G C A C G T A G T C A G T C A G T C G A T C G C A T C G A T A T C G T G A C G T A C G A C T G T A C A T G C A C G T
A C G T C T A G A G C T G A C T C T A G A G T C A G T C G T C A C G A T T C A G T C A G G A T C C T G A T C G A G A T C T A G C T C A G

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:KGCTYCCCTWSCNYCC
-GTTGCCATGGCAACM
 A C G T T A C G A T G C A C G T A G T C A G T C A G T C G A T C G C A T C G A T A T C G T G A C G T A C G A C T G T A C A T G C
A C G T C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:KGCTYCCCTWSCNYCC-
---CCCCCTTGGGCCCC
 A C G T T A C G A T G C A C G T A G T C A G T C A G T C G A T C G C A T C G A T A T C G T G A C G T A C G A C T G T A C A T G C A C G T
A C G T A C G T A C G T A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:KGCTYCCCTWSCNYCC
-ATTTCCCAGVAKSCY
 A C G T T A C G A T G C A C G T A G T C A G T C A G T C G A T C G C A T C G A T A T C G T G A C G T A C G A C T G T A C A T G C
A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

POL013.1_MED-1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:KGCTYCCCTWSCNYCC
-GCTCCG---------
 A C G T T A C G A T G C A C G T A G T C A G T C A G T C G A T C G C A T C G A T A T C G T G A C G T A C G A C T G T A C A T G C
A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:KGCTYCCCTWSCNYCC
-GCTTCC---------
 A C G T T A C G A T G C A C G T A G T C A G T C A G T C G A T C G C A T C G A T A T C G T G A C G T A C G A C T G T A C A T G C
A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:KGCTYCCCTWSCNYCC
-TGTTKCCTAGCAACM
 A C G T T A C G A T G C A C G T A G T C A G T C A G T C G A T C G C A T C G A T A T C G T G A C G T A C G A C T G T A C A T G C
A C G T C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C