Information for 12-KACASATCTMAWY (Motif 26)

A C T G C T G A A T G C C G T A A T C G C G T A A C G T A T G C A G C T T G A C C G T A C G T A A G T C
Reverse Opposite:
T C A G C G A T A C G T A C T G C T G A A T C G G T C A A C G T T A G C A C G T A T C G A G C T G T A C
p-value:1e-9
log p-value:-2.230e+01
Information Content per bp:1.827
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets41.6 +/- 31.8bp
Average Position of motif in Background49.5 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TGIF2/MA0797.1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-KACASATCTMAWY
TGACAGCTGTCA--
 A C G T A C T G C T G A A T G C C G T A A T C G C G T A A C G T A T G C A G C T T G A C C G T A C G T A A G T C
G C A T T A C G C T G A G A T C C T G A A T C G G T A C G A C T C T A G G A C T G A T C C G T A A C G T A C G T

PKNOX1/MA0782.1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-KACASATCTMAWY
TGACAGGTGTCA--
 A C G T A C T G C T G A A T G C C G T A A T C G C G T A A C G T A T G C A G C T T G A C C G T A C G T A A G T C
G A C T T A C G C T G A G T A C C T G A C A T G T A C G A G C T T C A G G C A T T A G C C G T A A C G T A C G T

PKNOX2/MA0783.1/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-KACASATCTMAWY
TGACACCTGTCA--
 A C G T A C T G C T G A A T G C C G T A A T C G C G T A A C G T A T G C A G C T T G A C C G T A C G T A A G T C
G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A A C G T A C G T

TGIF1/MA0796.1/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-KACASATCTMAWY
TGACAGCTGTCA--
 A C G T A C T G C T G A A T G C C G T A A T C G C G T A A C G T A T G C A G C T T G A C C G T A C G T A A G T C
G C A T C A T G C G T A A T G C T C G A A T C G T G A C A G C T T C A G A G C T A G T C C G T A A C G T A C G T

ZBTB18/MA0698.1/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:KACASATCTMAWY-
-NAACATCTGGATN
 A C T G C T G A A T G C C G T A A T C G C G T A A C G T A T G C A G C T T G A C C G T A C G T A A G T C A C G T
A C G T T C A G G T C A C T G A A G T C T G C A C A G T T A G C G C A T C A T G A C T G T G C A G C A T C A T G

GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---KACASATCTMAWY----
NNNNNBAGATAWYATCTVHN
 A C G T A C G T A C G T A C T G C T G A A T G C C G T A A T C G C G T A A C G T A T G C A G C T T G A C C G T A C G T A A G T C A C G T A C G T A C G T A C G T
C T G A C T G A C T A G T C G A C G T A A T G C C G T A A C T G C G T A A C G T C T G A C G A T A G C T C G T A A C G T A G T C C G A T T A C G G T C A G C A T

PB0126.1_Gata5_2/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--KACASATCTMAWY--
GACAGAGATATCAGTGT
 A C G T A C G T A C T G C T G A A T G C C G T A A T C G C G T A A C G T A T G C A G C T T G A C C G T A C G T A A G T C A C G T A C G T
T C A G T G C A A G T C G T C A C T A G G T C A C A T G T C G A C A G T G T C A C A G T G A T C C G T A C T A G G A C T A C G T A C G T

PH0140.1_Pknox1/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----KACASATCTMAWY
GGATTGACAGGTCNTT--
 A C G T A C G T A C G T A C G T A C G T A C T G C T G A A T G C C G T A A T C G C G T A A C G T A T G C A G C T T G A C C G T A C G T A A G T C
A C T G A C T G C G T A C G A T A C G T C T A G C G T A A G T C C T G A A C T G A T C G G A C T T A G C A C G T G A C T G C A T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:KACASATCTMAWY
AACATATGTC---
 A C T G C T G A A T G C C G T A A T C G C G T A A C G T A T G C A G C T T G A C C G T A C G T A A G T C
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T A C G T

PB0125.1_Gata3_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---KACASATCTMAWY------
TTTTGTAGATTTTATCGACTTA
 A C G T A C G T A C G T A C T G C T G A A T G C C G T A A T C G C G T A A C G T A T G C A G C T T G A C C G T A C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A C G T G C A T C A G T T C A G A G C T G C T A C T A G G C T A G A C T C G A T A C G T G A C T C T G A A C G T G A T C C T A G T C G A A T G C C G A T G C A T G T C A