Information for 9-GGGCTCAGGGTCAAAG (Motif 15)

A C T G A C T G A T C G A G T C A G C T A G T C C G T A A C T G C T A G C T A G A C G T T A G C C T G A T G C A C G T A C T A G
Reverse Opposite:
A G T C C G A T A C G T A G C T A C T G G T C A A G T C A G T C A G T C C G A T A C T G C T G A C T A G T A G C A G T C A G T C
p-value:1e-7
log p-value:-1.839e+01
Information Content per bp:1.794
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.7 +/- 23.7bp
Average Position of motif in Background55.8 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GGGCTCAGGGTCAAAG
-AGGTCAAGGTCA---
 A C T G A C T G A T C G A G T C A G C T A G T C C G T A A C T G C T A G C T A G A C G T T A G C C T G A T G C A C G T A C T A G
A C G T C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A A C G T A C G T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:2
Score:0.57
Offset:6
Orientation:forward strand
Alignment:GGGCTCAGGGTCAAAG-
------AGGGTAACAGC
 A C T G A C T G A T C G A G T C A G C T A G T C C G T A A C T G C T A G C T A G A C G T T A G C C T G A T G C A C G T A C T A G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T C G C T A G A C T G C A G T C G T A C G T A T A G C C T G A A C T G T A G C

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGGCTCAGGGTCAAAG
GTAGGTCACTGGGTCA---
 A C G T A C G T A C G T A C T G A C T G A T C G A G T C A G C T A G T C C G T A A C T G C T A G C T A G A C G T T A G C C T G A T G C A C G T A C T A G
A T C G A G C T C T G A C T A G A C T G A C G T G T A C G C T A A T G C A C G T C T A G C A T G T A C G C G A T A T G C C G T A A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGCTCAGGGTCAAAG
-AGGTCAAGGTCA---
 A C T G A C T G A T C G A G T C A G C T A G T C C G T A A C T G C T A G C T A G A C G T T A G C C T G A T G C A C G T A C T A G
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A A C G T A C G T A C G T

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GGGCTCAGGGTCAAAG
----TCAAGGTCATA-
 A C T G A C T G A T C G A G T C A G C T A G T C C G T A A C T G C T A G C T A G A C G T T A G C C T G A T G C A C G T A C T A G
A C G T A C G T A C G T A C G T G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGGCTCAGGGTCAAAG
AAGTTCAAGGTCAGC-
 A C T G A C T G A T C G A G T C A G C T A G T C C G T A A C T G C T A G C T A G A C G T T A G C C T G A T G C A C G T A C T A G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GGGCTCAGGGTCAAAG
WTGSCCTSAGGS------
 A C G T A C G T A C T G A C T G A T C G A G T C A G C T A G T C C G T A A C T G C T A G C T A G A C G T T A G C C T G A T G C A C G T A C T A G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GGGCTCAGGGTCAAAG
-GCCTCAGGGCAT---
 A C T G A C T G A T C G A G T C A G C T A G T C C G T A A C T G C T A G C T A G A C G T T A G C C T G A T G C A C G T A C T A G
A C G T A T C G A G T C A G T C A G C T A T G C C T G A C T A G A C T G A T C G G T A C G C T A C G A T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GGGCTCAGGGTCAAAG
---BTCAAGGTCA---
 A C T G A C T G A T C G A G T C A G C T A G T C C G T A A C T G C T A G C T A G A C G T T A G C C T G A T G C A C G T A C T A G
A C G T A C G T A C G T A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T

PB0118.1_Esrra_2/Jaspar

Match Rank:10
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----GGGCTCAGGGTCAAAG
GGCGAGGGGTCAAGGGC----
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A T C G A G T C A G C T A G T C C G T A A C T G C T A G C T A G A C G T T A G C C T G A T G C A C G T A C T A G
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C A C G T A C G T A C G T A C G T