Information for 5-TGGCCTTTTC (Motif 10)

C G A T A C T G T A C G A T G C G T A C A G C T A G C T A G C T A C G T A G T C
Reverse Opposite:
T C A G C G T A C T G A C T G A C T G A A C T G A T C G A T G C G T A C G C T A
p-value:1e-9
log p-value:-2.120e+01
Information Content per bp:1.835
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.52%
Number of Background Sequences with motif432.6
Percentage of Background Sequences with motif0.88%
Average Position of motif in Targets53.0 +/- 26.8bp
Average Position of motif in Background47.4 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:1
Score:0.77
Offset:0
Orientation:forward strand
Alignment:TGGCCTTTTC--
TGACCTTTNCNT
 C G A T A C T G T A C G A T G C G T A C A G C T A G C T A G C T A C G T A G T C A C G T A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:reverse strand
Alignment:----TGGCCTTTTC--
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T C G A T A C T G T A C G A T G C G T A C A G C T A G C T A G C T A C G T A G T C A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----TGGCCTTTTC--
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T C G A T A C T G T A C G A T G C G T A C A G C T A G C T A G C T A C G T A G T C A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TGGCCTTTTC
BNTGDCCTTG--
 A C G T A C G T C G A T A C T G T A C G A T G C G T A C A G C T A G C T A G C T A C G T A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCTTTTC
GTGACCTT---
 A C G T C G A T A C T G T A C G A T G C G T A C A G C T A G C T A G C T A C G T A G T C
A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TGGCCTTTTC
CTGACCTTTG-
 A C G T C G A T A C T G T A C G A T G C G T A C A G C T A G C T A G C T A C G T A G T C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:TGGCCTTTTC----
TGACCTTTGCCCTA
 C G A T A C T G T A C G A T G C G T A C A G C T A G C T A G C T A C G T A G T C A C G T A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:8
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TGGCCTTTTC--
NNATTGGACTTTNGNN
 A C G T A C G T A C G T A C G T C G A T A C T G T A C G A T G C G T A C A G C T A G C T A G C T A C G T A G T C A C G T A C G T
C G A T C A G T G C T A C A G T G A C T C T A G C A T G G T C A G T A C A G C T G A C T G C A T C A G T C T A G T G A C T G A C

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGGCCTTTTC----
TGACCTTTGCCCCA
 C G A T A C T G T A C G A T G C G T A C A G C T A G C T A G C T A C G T A G T C A C G T A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGGCCTTTTC-----
TGACCTTTGCCCTAN
 C G A T A C T G T A C G A T G C G T A C A G C T A G C T A G C T A C G T A G T C A C G T A C G T A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C