Information for 5-CCMCGAGTCA (Motif 7)

A T G C A G T C G T C A A G T C A T C G G C T A T A C G C G A T A G T C C G T A
Reverse Opposite:
C G A T A C T G G C T A A T G C C G A T A T G C T C A G C A G T C T A G T A C G
p-value:1e-11
log p-value:-2.701e+01
Information Content per bp:1.700
Number of Target Sequences with motif94.0
Percentage of Target Sequences with motif10.20%
Number of Background Sequences with motif2086.9
Percentage of Background Sequences with motif4.63%
Average Position of motif in Targets52.3 +/- 27.6bp
Average Position of motif in Background51.0 +/- 30.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFE3/MA0831.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-CCMCGAGTCA
ATCACGTGAC-
 A C G T A T G C A G T C G T C A A G T C A T C G G C T A T A C G C G A T A G T C C G T A
T C G A A G C T A T G C G C T A A G T C T C A G G C A T A C T G T G C A G A T C A C G T

HEY2/MA0649.1/Jaspar

Match Rank:2
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-CCMCGAGTCA
GGCACGTGNC-
 A C G T A T G C A G T C G T C A A G T C A T C G G C T A T A C G C G A T A G T C C G T A
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:CCMCGAGTCA
-CACGTGDC-
 A T G C A G T C G T C A A G T C A T C G G C T A T A C G C G A T A G T C C G T A
A C G T G A T C C T G A A G T C C T A G G C A T C T A G C G T A G A T C A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-CCMCGAGTCA
ACCACGTGAC-
 A C G T A T G C A G T C G T C A A G T C A T C G G C T A T A C G C G A T A G T C C G T A
T C G A G A T C A G T C C G T A A G T C T C A G A G C T A C T G T G C A A G T C A C G T

Arntl/MA0603.1/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCMCGAGTCA
NCACGTGACN
 A T G C A G T C G T C A A G T C A T C G G C T A T A C G C G A T A G T C C G T A
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:CCMCGAGTCA
NCACGTGACN
 A T G C A G T C G T C A A G T C A T C G G C T A T A C G C G A T A G T C C G T A
A G T C G T A C C G T A A G T C T C A G C A G T A C T G T G C A A G T C G A T C

NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:7
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCMCGAGTCA
KCCACGTGAC-
 A C G T A T G C A G T C G T C A A G T C A T C G G C T A T A C G C G A T A G T C C G T A
A C T G T G A C G T A C C G T A A G T C T A C G A C G T A C T G G T C A A G T C A C G T

TFEB/MA0692.1/Jaspar

Match Rank:8
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCMCGAGTCA
ATCACGTGAC-
 A C G T A T G C A G T C G T C A A G T C A T C G G C T A T A C G C G A T A G T C C G T A
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-CCMCGAGTCA
NCCACGTG---
 A C G T A T G C A G T C G T C A A G T C A T C G G C T A T A C G C G A T A G T C C G T A
T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:10
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CCMCGAGTCA
GACACGTGCC-
 A C G T A T G C A G T C G T C A A G T C A T C G G C T A T A C G C G A T A G T C C G T A
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T